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The burden of typhoid fever in low- and middle-income countries: A meta-regression approach

BACKGROUND: Upcoming vaccination efforts against typhoid fever require an assessment of the baseline burden of disease in countries at risk. There are no typhoid incidence data from most low- and middle-income countries (LMICs), so model-based estimates offer insights for decision-makers in the abse...

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Autores principales: Antillón, Marina, Warren, Joshua L., Crawford, Forrest W., Weinberger, Daniel M., Kürüm, Esra, Pak, Gi Deok, Marks, Florian, Pitzer, Virginia E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5344533/
https://www.ncbi.nlm.nih.gov/pubmed/28241011
http://dx.doi.org/10.1371/journal.pntd.0005376
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author Antillón, Marina
Warren, Joshua L.
Crawford, Forrest W.
Weinberger, Daniel M.
Kürüm, Esra
Pak, Gi Deok
Marks, Florian
Pitzer, Virginia E.
author_facet Antillón, Marina
Warren, Joshua L.
Crawford, Forrest W.
Weinberger, Daniel M.
Kürüm, Esra
Pak, Gi Deok
Marks, Florian
Pitzer, Virginia E.
author_sort Antillón, Marina
collection PubMed
description BACKGROUND: Upcoming vaccination efforts against typhoid fever require an assessment of the baseline burden of disease in countries at risk. There are no typhoid incidence data from most low- and middle-income countries (LMICs), so model-based estimates offer insights for decision-makers in the absence of readily available data. METHODS: We developed a mixed-effects model fit to data from 32 population-based studies of typhoid incidence in 22 locations in 14 countries. We tested the contribution of economic and environmental indices for predicting typhoid incidence using a stochastic search variable selection algorithm. We performed out-of-sample validation to assess the predictive performance of the model. RESULTS: We estimated that 17.8 million cases of typhoid fever occur each year in LMICs (95% credible interval: 6.9–48.4 million). Central Africa was predicted to experience the highest incidence of typhoid, followed by select countries in Central, South, and Southeast Asia. Incidence typically peaked in the 2–4 year old age group. Models incorporating widely available economic and environmental indicators were found to describe incidence better than null models. CONCLUSIONS: Recent estimates of typhoid burden may under-estimate the number of cases and magnitude of uncertainty in typhoid incidence. Our analysis permits prediction of overall as well as age-specific incidence of typhoid fever in LMICs, and incorporates uncertainty around the model structure and estimates of the predictors. Future studies are needed to further validate and refine model predictions and better understand year-to-year variation in cases.
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spelling pubmed-53445332017-03-29 The burden of typhoid fever in low- and middle-income countries: A meta-regression approach Antillón, Marina Warren, Joshua L. Crawford, Forrest W. Weinberger, Daniel M. Kürüm, Esra Pak, Gi Deok Marks, Florian Pitzer, Virginia E. PLoS Negl Trop Dis Research Article BACKGROUND: Upcoming vaccination efforts against typhoid fever require an assessment of the baseline burden of disease in countries at risk. There are no typhoid incidence data from most low- and middle-income countries (LMICs), so model-based estimates offer insights for decision-makers in the absence of readily available data. METHODS: We developed a mixed-effects model fit to data from 32 population-based studies of typhoid incidence in 22 locations in 14 countries. We tested the contribution of economic and environmental indices for predicting typhoid incidence using a stochastic search variable selection algorithm. We performed out-of-sample validation to assess the predictive performance of the model. RESULTS: We estimated that 17.8 million cases of typhoid fever occur each year in LMICs (95% credible interval: 6.9–48.4 million). Central Africa was predicted to experience the highest incidence of typhoid, followed by select countries in Central, South, and Southeast Asia. Incidence typically peaked in the 2–4 year old age group. Models incorporating widely available economic and environmental indicators were found to describe incidence better than null models. CONCLUSIONS: Recent estimates of typhoid burden may under-estimate the number of cases and magnitude of uncertainty in typhoid incidence. Our analysis permits prediction of overall as well as age-specific incidence of typhoid fever in LMICs, and incorporates uncertainty around the model structure and estimates of the predictors. Future studies are needed to further validate and refine model predictions and better understand year-to-year variation in cases. Public Library of Science 2017-02-27 /pmc/articles/PMC5344533/ /pubmed/28241011 http://dx.doi.org/10.1371/journal.pntd.0005376 Text en © 2017 Antillón et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Antillón, Marina
Warren, Joshua L.
Crawford, Forrest W.
Weinberger, Daniel M.
Kürüm, Esra
Pak, Gi Deok
Marks, Florian
Pitzer, Virginia E.
The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
title The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
title_full The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
title_fullStr The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
title_full_unstemmed The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
title_short The burden of typhoid fever in low- and middle-income countries: A meta-regression approach
title_sort burden of typhoid fever in low- and middle-income countries: a meta-regression approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5344533/
https://www.ncbi.nlm.nih.gov/pubmed/28241011
http://dx.doi.org/10.1371/journal.pntd.0005376
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