Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor

Thermoanaerobacterium sp. strain PSU-2 was isolated from thermophilic hydrogen producing reactor and subjected to draft genome sequencing on 454 pyrosequencing and annotated on RAST. The draft genome sequence of strain PSU-2 contains 2,552,497 bases with an estimated G + C content of 35.2%, 2555 CDS...

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Autores principales: O-Thong, Sompong, Khongkliang, Peerawat, Mamimin, Chonticha, Singkhala, Apinya, Prasertsan, Poonsuk, Birkeland, Nils-Kåre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347514/
https://www.ncbi.nlm.nih.gov/pubmed/28337413
http://dx.doi.org/10.1016/j.gdata.2017.02.012
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author O-Thong, Sompong
Khongkliang, Peerawat
Mamimin, Chonticha
Singkhala, Apinya
Prasertsan, Poonsuk
Birkeland, Nils-Kåre
author_facet O-Thong, Sompong
Khongkliang, Peerawat
Mamimin, Chonticha
Singkhala, Apinya
Prasertsan, Poonsuk
Birkeland, Nils-Kåre
author_sort O-Thong, Sompong
collection PubMed
description Thermoanaerobacterium sp. strain PSU-2 was isolated from thermophilic hydrogen producing reactor and subjected to draft genome sequencing on 454 pyrosequencing and annotated on RAST. The draft genome sequence of strain PSU-2 contains 2,552,497 bases with an estimated G + C content of 35.2%, 2555 CDS, 8 rRNAs and 57 tRNAs. The strain had a number of genes responsible for carbohydrates metabolic, amino acids and derivatives, and protein metabolism of 17.7%, 14.39% and 9.81%, respectively. Strain PSU-2 also had gene responsible for hydrogen biosynthesis as well as the genes related to Ni-Fe hydrogenase. Comparative genomic analysis indicates strain PSU-2 shares about 94% genome sequence similarity with Thermoanaerobacterium xylanolyticum LX-11. The nucleotide sequence of this draft genome was deposited into DDBJ/ENA/GenBank under the accession MSQD00000000.
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spelling pubmed-53475142017-03-23 Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor O-Thong, Sompong Khongkliang, Peerawat Mamimin, Chonticha Singkhala, Apinya Prasertsan, Poonsuk Birkeland, Nils-Kåre Genom Data Data in Brief Thermoanaerobacterium sp. strain PSU-2 was isolated from thermophilic hydrogen producing reactor and subjected to draft genome sequencing on 454 pyrosequencing and annotated on RAST. The draft genome sequence of strain PSU-2 contains 2,552,497 bases with an estimated G + C content of 35.2%, 2555 CDS, 8 rRNAs and 57 tRNAs. The strain had a number of genes responsible for carbohydrates metabolic, amino acids and derivatives, and protein metabolism of 17.7%, 14.39% and 9.81%, respectively. Strain PSU-2 also had gene responsible for hydrogen biosynthesis as well as the genes related to Ni-Fe hydrogenase. Comparative genomic analysis indicates strain PSU-2 shares about 94% genome sequence similarity with Thermoanaerobacterium xylanolyticum LX-11. The nucleotide sequence of this draft genome was deposited into DDBJ/ENA/GenBank under the accession MSQD00000000. Elsevier 2017-02-28 /pmc/articles/PMC5347514/ /pubmed/28337413 http://dx.doi.org/10.1016/j.gdata.2017.02.012 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data in Brief
O-Thong, Sompong
Khongkliang, Peerawat
Mamimin, Chonticha
Singkhala, Apinya
Prasertsan, Poonsuk
Birkeland, Nils-Kåre
Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor
title Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor
title_full Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor
title_fullStr Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor
title_full_unstemmed Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor
title_short Draft genome sequence of Thermoanaerobacterium sp. strain PSU-2 isolated from thermophilic hydrogen producing reactor
title_sort draft genome sequence of thermoanaerobacterium sp. strain psu-2 isolated from thermophilic hydrogen producing reactor
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347514/
https://www.ncbi.nlm.nih.gov/pubmed/28337413
http://dx.doi.org/10.1016/j.gdata.2017.02.012
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