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Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population
Interleukin-17 plays a crucial role in inflammation-related carcinogenesis. We hypothesize that genetic variants in IL-17 are associated with gastric cancer (GCa) risk, and we genotyped five potentially functional single nucleotide polymorphisms (SNPs) (rs1974226 G > A, rs2275913 A > G, rs3819...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347698/ https://www.ncbi.nlm.nih.gov/pubmed/27577072 http://dx.doi.org/10.18632/oncotarget.11616 |
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author | Zhou, Fei Qiu, Li-Xin Cheng, Lei Wang, Meng-Yun Li, Jin Sun, Meng-Hong Yang, Ya-Jun Wang, Jiu-Cun Jin, Li Wang, Ya-Nong Wei, Qing-Yi |
author_facet | Zhou, Fei Qiu, Li-Xin Cheng, Lei Wang, Meng-Yun Li, Jin Sun, Meng-Hong Yang, Ya-Jun Wang, Jiu-Cun Jin, Li Wang, Ya-Nong Wei, Qing-Yi |
author_sort | Zhou, Fei |
collection | PubMed |
description | Interleukin-17 plays a crucial role in inflammation-related carcinogenesis. We hypothesize that genetic variants in IL-17 are associated with gastric cancer (GCa) risk, and we genotyped five potentially functional single nucleotide polymorphisms (SNPs) (rs1974226 G > A, rs2275913 A > G, rs3819024 A > G, rs4711998 A > G, and rs8193036 C > T) of IL-17 in 1121 GCa patients and 1216 cancer-free controls in an eastern Chinese population. Logistic regression analysis was used to calculate odds ratios (OR) and 95% confidence intervals (CI). Meta-analysis and genotype-mRNA expression correlation were performed to further validate positive associations. We found that an increased GCa risk was independently associated with rs1974226 (adjusted OR = 2.60, 95% CI = 1.27–5.32 for AA vs. GG + GA) and rs2275913 (adjusted OR = 1.33, 95% CI = 1.03–1.72 for GA + AA vs. GG), while a decreased GCa risk was independently associated with rs3819024 (adjusted OR = 0.72, 95% CI = 0.54–0.96 for GG vs. AA + AG). Additional meta-analyses confirmed the observed risk association with rs2275913. We also found that two IL-17 haplotypes (G-G-G-A-C) and (A-G-G-A-C) (in the order of rs1974226, rs2275913, rs3819024, rs4711998 and rs8193036) were associated with a reduced GCa risk (adjusted OR = 0.64, 95% CI = 0.46–0.89 and adjusted OR = 0.38, 95% CI = 0.17–0.81, respectively). However, the expression Quantitative Trait Locus (eQTL) analysis for the genotype-phenotype correlation did not find mRNA expression changes associated with either the genotypes. In conclusions, genetic variants of IL-17 are likely to be associated with risk of GCa, and additional larger studies with functional validation are needed to explore the molecular mechanisms underlying the observed associations. |
format | Online Article Text |
id | pubmed-5347698 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-53476982017-03-31 Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population Zhou, Fei Qiu, Li-Xin Cheng, Lei Wang, Meng-Yun Li, Jin Sun, Meng-Hong Yang, Ya-Jun Wang, Jiu-Cun Jin, Li Wang, Ya-Nong Wei, Qing-Yi Oncotarget Research Paper Interleukin-17 plays a crucial role in inflammation-related carcinogenesis. We hypothesize that genetic variants in IL-17 are associated with gastric cancer (GCa) risk, and we genotyped five potentially functional single nucleotide polymorphisms (SNPs) (rs1974226 G > A, rs2275913 A > G, rs3819024 A > G, rs4711998 A > G, and rs8193036 C > T) of IL-17 in 1121 GCa patients and 1216 cancer-free controls in an eastern Chinese population. Logistic regression analysis was used to calculate odds ratios (OR) and 95% confidence intervals (CI). Meta-analysis and genotype-mRNA expression correlation were performed to further validate positive associations. We found that an increased GCa risk was independently associated with rs1974226 (adjusted OR = 2.60, 95% CI = 1.27–5.32 for AA vs. GG + GA) and rs2275913 (adjusted OR = 1.33, 95% CI = 1.03–1.72 for GA + AA vs. GG), while a decreased GCa risk was independently associated with rs3819024 (adjusted OR = 0.72, 95% CI = 0.54–0.96 for GG vs. AA + AG). Additional meta-analyses confirmed the observed risk association with rs2275913. We also found that two IL-17 haplotypes (G-G-G-A-C) and (A-G-G-A-C) (in the order of rs1974226, rs2275913, rs3819024, rs4711998 and rs8193036) were associated with a reduced GCa risk (adjusted OR = 0.64, 95% CI = 0.46–0.89 and adjusted OR = 0.38, 95% CI = 0.17–0.81, respectively). However, the expression Quantitative Trait Locus (eQTL) analysis for the genotype-phenotype correlation did not find mRNA expression changes associated with either the genotypes. In conclusions, genetic variants of IL-17 are likely to be associated with risk of GCa, and additional larger studies with functional validation are needed to explore the molecular mechanisms underlying the observed associations. Impact Journals LLC 2016-08-25 /pmc/articles/PMC5347698/ /pubmed/27577072 http://dx.doi.org/10.18632/oncotarget.11616 Text en Copyright: © 2016 Zhou et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhou, Fei Qiu, Li-Xin Cheng, Lei Wang, Meng-Yun Li, Jin Sun, Meng-Hong Yang, Ya-Jun Wang, Jiu-Cun Jin, Li Wang, Ya-Nong Wei, Qing-Yi Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population |
title | Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population |
title_full | Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population |
title_fullStr | Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population |
title_full_unstemmed | Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population |
title_short | Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population |
title_sort | associations of genotypes and haplotypes of il-17 with risk of gastric cancer in an eastern chinese population |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347698/ https://www.ncbi.nlm.nih.gov/pubmed/27577072 http://dx.doi.org/10.18632/oncotarget.11616 |
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