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An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping

Phase imaging benefits from strong susceptibility effects at very high field and the high signal‐to‐noise ratio (SNR) afforded by multi‐channel coils. Combining the information from coils is not trivial, however, as the phase that originates in local field effects (the source of interesting contrast...

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Autores principales: Robinson, Simon Daniel, Bredies, Kristian, Khabipova, Diana, Dymerska, Barbara, Marques, José P., Schweser, Ferdinand
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5348291/
https://www.ncbi.nlm.nih.gov/pubmed/27619999
http://dx.doi.org/10.1002/nbm.3601
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author Robinson, Simon Daniel
Bredies, Kristian
Khabipova, Diana
Dymerska, Barbara
Marques, José P.
Schweser, Ferdinand
author_facet Robinson, Simon Daniel
Bredies, Kristian
Khabipova, Diana
Dymerska, Barbara
Marques, José P.
Schweser, Ferdinand
author_sort Robinson, Simon Daniel
collection PubMed
description Phase imaging benefits from strong susceptibility effects at very high field and the high signal‐to‐noise ratio (SNR) afforded by multi‐channel coils. Combining the information from coils is not trivial, however, as the phase that originates in local field effects (the source of interesting contrast) is modified by the inhomogeneous sensitivity of each coil. This has historically been addressed by referencing individual coil sensitivities to that of a volume coil, but alternative approaches are required for ultra‐high field systems in which no such coil is available. An additional challenge in phase imaging is that the phase that develops up to the echo time is “wrapped” into a range of 2π radians. Phase wraps need to be removed in order to reveal the underlying phase distribution of interest. Beginning with a coil combination using a homogeneous reference volume coil – the Roemer approach – which can be applied at 3 T and lower field strengths, we review alternative methods for combining single‐echo and multi‐echo phase images where no such reference coil is available. These are applied to high‐resolution data acquired at 7 T and their effectiveness assessed via an index of agreement between phase values over channels and the contrast‐to‐noise ratio in combined images. The virtual receiver coil and COMPOSER approaches were both found to be computationally efficient and effective. The main features of spatial and temporal phase unwrapping methods are reviewed, placing particular emphasis on recent developments in temporal phase unwrapping and Laplacian approaches. The features and performance of these are illustrated in application to simulated and high‐resolution in vivo data. Temporal unwrapping was the fastest of the methods tested and the Laplacian the most robust in images with low SNR. © 2016 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd.
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spelling pubmed-53482912017-04-06 An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping Robinson, Simon Daniel Bredies, Kristian Khabipova, Diana Dymerska, Barbara Marques, José P. Schweser, Ferdinand NMR Biomed Special Issue Review Articles Phase imaging benefits from strong susceptibility effects at very high field and the high signal‐to‐noise ratio (SNR) afforded by multi‐channel coils. Combining the information from coils is not trivial, however, as the phase that originates in local field effects (the source of interesting contrast) is modified by the inhomogeneous sensitivity of each coil. This has historically been addressed by referencing individual coil sensitivities to that of a volume coil, but alternative approaches are required for ultra‐high field systems in which no such coil is available. An additional challenge in phase imaging is that the phase that develops up to the echo time is “wrapped” into a range of 2π radians. Phase wraps need to be removed in order to reveal the underlying phase distribution of interest. Beginning with a coil combination using a homogeneous reference volume coil – the Roemer approach – which can be applied at 3 T and lower field strengths, we review alternative methods for combining single‐echo and multi‐echo phase images where no such reference coil is available. These are applied to high‐resolution data acquired at 7 T and their effectiveness assessed via an index of agreement between phase values over channels and the contrast‐to‐noise ratio in combined images. The virtual receiver coil and COMPOSER approaches were both found to be computationally efficient and effective. The main features of spatial and temporal phase unwrapping methods are reviewed, placing particular emphasis on recent developments in temporal phase unwrapping and Laplacian approaches. The features and performance of these are illustrated in application to simulated and high‐resolution in vivo data. Temporal unwrapping was the fastest of the methods tested and the Laplacian the most robust in images with low SNR. © 2016 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd. John Wiley and Sons Inc. 2016-09-13 2017-04 /pmc/articles/PMC5348291/ /pubmed/27619999 http://dx.doi.org/10.1002/nbm.3601 Text en © 2016 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Special Issue Review Articles
Robinson, Simon Daniel
Bredies, Kristian
Khabipova, Diana
Dymerska, Barbara
Marques, José P.
Schweser, Ferdinand
An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping
title An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping
title_full An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping
title_fullStr An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping
title_full_unstemmed An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping
title_short An illustrated comparison of processing methods for MR phase imaging and QSM: combining array coil signals and phase unwrapping
title_sort illustrated comparison of processing methods for mr phase imaging and qsm: combining array coil signals and phase unwrapping
topic Special Issue Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5348291/
https://www.ncbi.nlm.nih.gov/pubmed/27619999
http://dx.doi.org/10.1002/nbm.3601
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