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Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data
Heard Island in the Southern Ocean is a biological hotspot that is suffering the effects of climate change. Significant glacier retreat has generated proglacial lagoons, some of which are open to the ocean. We used pyrotag sequencing of SSU rRNA genes and environmental data to characterize microorga...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5349573/ https://www.ncbi.nlm.nih.gov/pubmed/28290555 http://dx.doi.org/10.1038/srep44480 |
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author | Allen, Michelle A. Cavicchioli, Ricardo |
author_facet | Allen, Michelle A. Cavicchioli, Ricardo |
author_sort | Allen, Michelle A. |
collection | PubMed |
description | Heard Island in the Southern Ocean is a biological hotspot that is suffering the effects of climate change. Significant glacier retreat has generated proglacial lagoons, some of which are open to the ocean. We used pyrotag sequencing of SSU rRNA genes and environmental data to characterize microorganisms from two pools adjacent to animal breeding areas, two glacial lagoons and Atlas Cove (marine site). The more abundant taxa included Actinobacteria, Bacteroidetes and Proteobacteria, ciliates and picoflagellates (e.g. Micromonas), and relatively few Archaea. Seal Pool, which is rich in organic matter, was characterized by a heterotrophic degradative community, while the less eutrophic Atlas Pool had more eucaryotic primary producers. Brown Lagoon, with the lowest nutrient levels, had Eucarya and Bacteria predicted to be oligotrophs, possess small cell sizes, and have the ability to metabolize organic matter. The marine influence on Winston Lagoon was evident by its salinity and the abundance of marine-like Gammaproteobacteria, while also lacking typical marine eucaryotes indicating the system was still functioning as a distinct niche. This is the first microbiology study of Heard Island and revealed that communities are distinct at each location and heavily influenced by local environmental factors. |
format | Online Article Text |
id | pubmed-5349573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53495732017-03-17 Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data Allen, Michelle A. Cavicchioli, Ricardo Sci Rep Article Heard Island in the Southern Ocean is a biological hotspot that is suffering the effects of climate change. Significant glacier retreat has generated proglacial lagoons, some of which are open to the ocean. We used pyrotag sequencing of SSU rRNA genes and environmental data to characterize microorganisms from two pools adjacent to animal breeding areas, two glacial lagoons and Atlas Cove (marine site). The more abundant taxa included Actinobacteria, Bacteroidetes and Proteobacteria, ciliates and picoflagellates (e.g. Micromonas), and relatively few Archaea. Seal Pool, which is rich in organic matter, was characterized by a heterotrophic degradative community, while the less eutrophic Atlas Pool had more eucaryotic primary producers. Brown Lagoon, with the lowest nutrient levels, had Eucarya and Bacteria predicted to be oligotrophs, possess small cell sizes, and have the ability to metabolize organic matter. The marine influence on Winston Lagoon was evident by its salinity and the abundance of marine-like Gammaproteobacteria, while also lacking typical marine eucaryotes indicating the system was still functioning as a distinct niche. This is the first microbiology study of Heard Island and revealed that communities are distinct at each location and heavily influenced by local environmental factors. Nature Publishing Group 2017-03-14 /pmc/articles/PMC5349573/ /pubmed/28290555 http://dx.doi.org/10.1038/srep44480 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Allen, Michelle A. Cavicchioli, Ricardo Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data |
title | Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data |
title_full | Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data |
title_fullStr | Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data |
title_full_unstemmed | Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data |
title_short | Microbial communities of aquatic environments on Heard Island characterized by pyrotag sequencing and environmental data |
title_sort | microbial communities of aquatic environments on heard island characterized by pyrotag sequencing and environmental data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5349573/ https://www.ncbi.nlm.nih.gov/pubmed/28290555 http://dx.doi.org/10.1038/srep44480 |
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