Cargando…
Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship
The current use of a single chemical component as the representative quality control marker of herbal food supplement is inadequate. In this CD80-Quantitative-Pattern-Activity-Relationship (QPAR) study, we built a bioactivity predictive model that can be applicable for complex mixtures. Through inte...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5350422/ https://www.ncbi.nlm.nih.gov/pubmed/28337449 http://dx.doi.org/10.1155/2017/3923865 |
_version_ | 1782514658462138368 |
---|---|
author | Ng, Michelle Chun-har Lau, Tsui-yan Fan, Kei Xu, Qing-song Poon, Josiah Poon, Simon K. Lam, Mary K. Chau, Foo-tim Sze, Daniel Man-Yuen |
author_facet | Ng, Michelle Chun-har Lau, Tsui-yan Fan, Kei Xu, Qing-song Poon, Josiah Poon, Simon K. Lam, Mary K. Chau, Foo-tim Sze, Daniel Man-Yuen |
author_sort | Ng, Michelle Chun-har |
collection | PubMed |
description | The current use of a single chemical component as the representative quality control marker of herbal food supplement is inadequate. In this CD80-Quantitative-Pattern-Activity-Relationship (QPAR) study, we built a bioactivity predictive model that can be applicable for complex mixtures. Through integrating the chemical fingerprinting profiles of the immunomodulating herb Radix Astragali (RA) extracts, and their related biological data of immunological marker CD80 expression on dendritic cells, a chemometric model using the Elastic Net Partial Least Square (EN-PLS) algorithm was established. The EN-PLS algorithm increased the biological predictive capability with lower value of RMSEP (11.66) and higher values of R(p)(2) (0.55) when compared to the standard PLS model. This CD80-QPAR platform provides a useful predictive model for unknown RA extract's bioactivities using the chemical fingerprint inputs. Furthermore, this bioactivity prediction platform facilitates identification of key bioactivity-related chemical components within complex mixtures for future drug discovery and understanding of the batch-to-batch consistency for quality clinical trials. |
format | Online Article Text |
id | pubmed-5350422 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-53504222017-03-23 Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship Ng, Michelle Chun-har Lau, Tsui-yan Fan, Kei Xu, Qing-song Poon, Josiah Poon, Simon K. Lam, Mary K. Chau, Foo-tim Sze, Daniel Man-Yuen Biomed Res Int Research Article The current use of a single chemical component as the representative quality control marker of herbal food supplement is inadequate. In this CD80-Quantitative-Pattern-Activity-Relationship (QPAR) study, we built a bioactivity predictive model that can be applicable for complex mixtures. Through integrating the chemical fingerprinting profiles of the immunomodulating herb Radix Astragali (RA) extracts, and their related biological data of immunological marker CD80 expression on dendritic cells, a chemometric model using the Elastic Net Partial Least Square (EN-PLS) algorithm was established. The EN-PLS algorithm increased the biological predictive capability with lower value of RMSEP (11.66) and higher values of R(p)(2) (0.55) when compared to the standard PLS model. This CD80-QPAR platform provides a useful predictive model for unknown RA extract's bioactivities using the chemical fingerprint inputs. Furthermore, this bioactivity prediction platform facilitates identification of key bioactivity-related chemical components within complex mixtures for future drug discovery and understanding of the batch-to-batch consistency for quality clinical trials. Hindawi Publishing Corporation 2017 2017-02-28 /pmc/articles/PMC5350422/ /pubmed/28337449 http://dx.doi.org/10.1155/2017/3923865 Text en Copyright © 2017 Michelle Chun-har Ng et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Ng, Michelle Chun-har Lau, Tsui-yan Fan, Kei Xu, Qing-song Poon, Josiah Poon, Simon K. Lam, Mary K. Chau, Foo-tim Sze, Daniel Man-Yuen Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship |
title | Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship |
title_full | Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship |
title_fullStr | Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship |
title_full_unstemmed | Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship |
title_short | Prediction of Radix Astragali Immunomodulatory Effect of CD80 Expression from Chromatograms by Quantitative Pattern-Activity Relationship |
title_sort | prediction of radix astragali immunomodulatory effect of cd80 expression from chromatograms by quantitative pattern-activity relationship |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5350422/ https://www.ncbi.nlm.nih.gov/pubmed/28337449 http://dx.doi.org/10.1155/2017/3923865 |
work_keys_str_mv | AT ngmichellechunhar predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT lautsuiyan predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT fankei predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT xuqingsong predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT poonjosiah predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT poonsimonk predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT lammaryk predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT chaufootim predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship AT szedanielmanyuen predictionofradixastragaliimmunomodulatoryeffectofcd80expressionfromchromatogramsbyquantitativepatternactivityrelationship |