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Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer

Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, th...

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Autores principales: Geng, Xin, Pu, Weilin, Tan, Yulong, Lu, Zhouyi, Wang, An, Tan, Lixing, Chen, Sidi, Guo, Shicheng, Wang, Jiucun, Chen, Xiaofeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351674/
https://www.ncbi.nlm.nih.gov/pubmed/28036263
http://dx.doi.org/10.18632/oncotarget.14256
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author Geng, Xin
Pu, Weilin
Tan, Yulong
Lu, Zhouyi
Wang, An
Tan, Lixing
Chen, Sidi
Guo, Shicheng
Wang, Jiucun
Chen, Xiaofeng
author_facet Geng, Xin
Pu, Weilin
Tan, Yulong
Lu, Zhouyi
Wang, An
Tan, Lixing
Chen, Sidi
Guo, Shicheng
Wang, Jiucun
Chen, Xiaofeng
author_sort Geng, Xin
collection PubMed
description Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, thirteen studies, including 2,119 samples were included in our meta-analysis. Simultaneously, four independent DNA methylation datasets from TCGA and GEO database were analyzed for validation. The pooled odds ratio of FHIT promoter methylation in cancer samples was 3.43 (95% CI: 1.85 to 6.36) compared with that in controls. In subgroup analysis, significant difference of FHIT gene promoter methylation status in NSCLC and controls was found in Asians but not in Caucasian population. In validation stage, 950 Caucasian samples, including 126 paired samples from TCGA, 568 cancer tissues and 256 normal controls from GEO database were analyzed, and all 8 CpG sites near the promoter region of FHIT gene were not significantly differentially methylated. Thus the diagnostic role of FHIT gene in the lung cancer may be relatively limited in the Caucasian population but useful in the Asians.
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spelling pubmed-53516742017-04-13 Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer Geng, Xin Pu, Weilin Tan, Yulong Lu, Zhouyi Wang, An Tan, Lixing Chen, Sidi Guo, Shicheng Wang, Jiucun Chen, Xiaofeng Oncotarget Research Paper Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, thirteen studies, including 2,119 samples were included in our meta-analysis. Simultaneously, four independent DNA methylation datasets from TCGA and GEO database were analyzed for validation. The pooled odds ratio of FHIT promoter methylation in cancer samples was 3.43 (95% CI: 1.85 to 6.36) compared with that in controls. In subgroup analysis, significant difference of FHIT gene promoter methylation status in NSCLC and controls was found in Asians but not in Caucasian population. In validation stage, 950 Caucasian samples, including 126 paired samples from TCGA, 568 cancer tissues and 256 normal controls from GEO database were analyzed, and all 8 CpG sites near the promoter region of FHIT gene were not significantly differentially methylated. Thus the diagnostic role of FHIT gene in the lung cancer may be relatively limited in the Caucasian population but useful in the Asians. Impact Journals LLC 2016-12-27 /pmc/articles/PMC5351674/ /pubmed/28036263 http://dx.doi.org/10.18632/oncotarget.14256 Text en Copyright: © 2017 Geng et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Geng, Xin
Pu, Weilin
Tan, Yulong
Lu, Zhouyi
Wang, An
Tan, Lixing
Chen, Sidi
Guo, Shicheng
Wang, Jiucun
Chen, Xiaofeng
Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
title Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
title_full Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
title_fullStr Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
title_full_unstemmed Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
title_short Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
title_sort quantitative assessment of the diagnostic role of fhit promoter methylation in non-small cell lung cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351674/
https://www.ncbi.nlm.nih.gov/pubmed/28036263
http://dx.doi.org/10.18632/oncotarget.14256
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