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Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer
Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, th...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351674/ https://www.ncbi.nlm.nih.gov/pubmed/28036263 http://dx.doi.org/10.18632/oncotarget.14256 |
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author | Geng, Xin Pu, Weilin Tan, Yulong Lu, Zhouyi Wang, An Tan, Lixing Chen, Sidi Guo, Shicheng Wang, Jiucun Chen, Xiaofeng |
author_facet | Geng, Xin Pu, Weilin Tan, Yulong Lu, Zhouyi Wang, An Tan, Lixing Chen, Sidi Guo, Shicheng Wang, Jiucun Chen, Xiaofeng |
author_sort | Geng, Xin |
collection | PubMed |
description | Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, thirteen studies, including 2,119 samples were included in our meta-analysis. Simultaneously, four independent DNA methylation datasets from TCGA and GEO database were analyzed for validation. The pooled odds ratio of FHIT promoter methylation in cancer samples was 3.43 (95% CI: 1.85 to 6.36) compared with that in controls. In subgroup analysis, significant difference of FHIT gene promoter methylation status in NSCLC and controls was found in Asians but not in Caucasian population. In validation stage, 950 Caucasian samples, including 126 paired samples from TCGA, 568 cancer tissues and 256 normal controls from GEO database were analyzed, and all 8 CpG sites near the promoter region of FHIT gene were not significantly differentially methylated. Thus the diagnostic role of FHIT gene in the lung cancer may be relatively limited in the Caucasian population but useful in the Asians. |
format | Online Article Text |
id | pubmed-5351674 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-53516742017-04-13 Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer Geng, Xin Pu, Weilin Tan, Yulong Lu, Zhouyi Wang, An Tan, Lixing Chen, Sidi Guo, Shicheng Wang, Jiucun Chen, Xiaofeng Oncotarget Research Paper Aberrant methylation of CpG islands acquired in promoter regions plays an important role in carcinogenesis. Accumulated evidence demonstrates FHIT gene promoter hyper-methylation is involved in non-small cell lung cancer (NSCLC). To test the diagnostic ability of FHIT methylation status on NSCLC, thirteen studies, including 2,119 samples were included in our meta-analysis. Simultaneously, four independent DNA methylation datasets from TCGA and GEO database were analyzed for validation. The pooled odds ratio of FHIT promoter methylation in cancer samples was 3.43 (95% CI: 1.85 to 6.36) compared with that in controls. In subgroup analysis, significant difference of FHIT gene promoter methylation status in NSCLC and controls was found in Asians but not in Caucasian population. In validation stage, 950 Caucasian samples, including 126 paired samples from TCGA, 568 cancer tissues and 256 normal controls from GEO database were analyzed, and all 8 CpG sites near the promoter region of FHIT gene were not significantly differentially methylated. Thus the diagnostic role of FHIT gene in the lung cancer may be relatively limited in the Caucasian population but useful in the Asians. Impact Journals LLC 2016-12-27 /pmc/articles/PMC5351674/ /pubmed/28036263 http://dx.doi.org/10.18632/oncotarget.14256 Text en Copyright: © 2017 Geng et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Geng, Xin Pu, Weilin Tan, Yulong Lu, Zhouyi Wang, An Tan, Lixing Chen, Sidi Guo, Shicheng Wang, Jiucun Chen, Xiaofeng Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer |
title | Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer |
title_full | Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer |
title_fullStr | Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer |
title_full_unstemmed | Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer |
title_short | Quantitative assessment of the diagnostic role of FHIT promoter methylation in non-small cell lung cancer |
title_sort | quantitative assessment of the diagnostic role of fhit promoter methylation in non-small cell lung cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351674/ https://www.ncbi.nlm.nih.gov/pubmed/28036263 http://dx.doi.org/10.18632/oncotarget.14256 |
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