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Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
Because synonymy treatment traditionally relies on morphological judgments, it usually causes many problems in species delimitation and in the biodiversity catalogue. For example, Diplopterygium simulans, which belongs to the Gleicheniaceae family, has been considered to be synonymous with D. glaucu...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351838/ https://www.ncbi.nlm.nih.gov/pubmed/28296890 http://dx.doi.org/10.1371/journal.pone.0164604 |
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author | Shu, Jiang-Ping Shang, Hui Jin, Dongmei Wei, Hong-Jin Zhou, Xi-Le Liu, Hong-Mei Gu, Yu-Feng Wang, Ying Wang, Fa-Guo Shen, Hui Zhang, Rui Adjie, Bayu Yan, Yue-Hong |
author_facet | Shu, Jiang-Ping Shang, Hui Jin, Dongmei Wei, Hong-Jin Zhou, Xi-Le Liu, Hong-Mei Gu, Yu-Feng Wang, Ying Wang, Fa-Guo Shen, Hui Zhang, Rui Adjie, Bayu Yan, Yue-Hong |
author_sort | Shu, Jiang-Ping |
collection | PubMed |
description | Because synonymy treatment traditionally relies on morphological judgments, it usually causes many problems in species delimitation and in the biodiversity catalogue. For example, Diplopterygium simulans, which belongs to the Gleicheniaceae family, has been considered to be synonymous with D. glaucum or D. giganteum based mainly on the morphology of its pinna rachis and blade. In the absence of molecular evidence, these revisions remain doubtful. DNA barcoding, which is considered to be a powerful method for species-level identification, was employed to assess the genetic distance among 9 members of the Diplopterygium genus. The results indicate that D. simulans is an independent species rather than a synonymy of D. glaucum or D. giganteum. Moreover, phylogenetic analysis uncovered the sisterhood of D. simulans and D. cantonense, which is supported by their geographical distributions and morphological traits. Incorrect synonymy treatment is prevalent in the characterization of biological diversity, and our study proposes a convenient and effective method for validating synonym treatments and discovering cryptic species. |
format | Online Article Text |
id | pubmed-5351838 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-53518382017-04-06 Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example Shu, Jiang-Ping Shang, Hui Jin, Dongmei Wei, Hong-Jin Zhou, Xi-Le Liu, Hong-Mei Gu, Yu-Feng Wang, Ying Wang, Fa-Guo Shen, Hui Zhang, Rui Adjie, Bayu Yan, Yue-Hong PLoS One Research Article Because synonymy treatment traditionally relies on morphological judgments, it usually causes many problems in species delimitation and in the biodiversity catalogue. For example, Diplopterygium simulans, which belongs to the Gleicheniaceae family, has been considered to be synonymous with D. glaucum or D. giganteum based mainly on the morphology of its pinna rachis and blade. In the absence of molecular evidence, these revisions remain doubtful. DNA barcoding, which is considered to be a powerful method for species-level identification, was employed to assess the genetic distance among 9 members of the Diplopterygium genus. The results indicate that D. simulans is an independent species rather than a synonymy of D. glaucum or D. giganteum. Moreover, phylogenetic analysis uncovered the sisterhood of D. simulans and D. cantonense, which is supported by their geographical distributions and morphological traits. Incorrect synonymy treatment is prevalent in the characterization of biological diversity, and our study proposes a convenient and effective method for validating synonym treatments and discovering cryptic species. Public Library of Science 2017-03-15 /pmc/articles/PMC5351838/ /pubmed/28296890 http://dx.doi.org/10.1371/journal.pone.0164604 Text en © 2017 Shu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Shu, Jiang-Ping Shang, Hui Jin, Dongmei Wei, Hong-Jin Zhou, Xi-Le Liu, Hong-Mei Gu, Yu-Feng Wang, Ying Wang, Fa-Guo Shen, Hui Zhang, Rui Adjie, Bayu Yan, Yue-Hong Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example |
title | Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example |
title_full | Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example |
title_fullStr | Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example |
title_full_unstemmed | Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example |
title_short | Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example |
title_sort | re-establishment of species from synonymies based on dna barcoding and phylogenetic analysis using diplopterygium simulans (gleicheniaceae) as an example |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351838/ https://www.ncbi.nlm.nih.gov/pubmed/28296890 http://dx.doi.org/10.1371/journal.pone.0164604 |
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