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Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example

Because synonymy treatment traditionally relies on morphological judgments, it usually causes many problems in species delimitation and in the biodiversity catalogue. For example, Diplopterygium simulans, which belongs to the Gleicheniaceae family, has been considered to be synonymous with D. glaucu...

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Autores principales: Shu, Jiang-Ping, Shang, Hui, Jin, Dongmei, Wei, Hong-Jin, Zhou, Xi-Le, Liu, Hong-Mei, Gu, Yu-Feng, Wang, Ying, Wang, Fa-Guo, Shen, Hui, Zhang, Rui, Adjie, Bayu, Yan, Yue-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351838/
https://www.ncbi.nlm.nih.gov/pubmed/28296890
http://dx.doi.org/10.1371/journal.pone.0164604
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author Shu, Jiang-Ping
Shang, Hui
Jin, Dongmei
Wei, Hong-Jin
Zhou, Xi-Le
Liu, Hong-Mei
Gu, Yu-Feng
Wang, Ying
Wang, Fa-Guo
Shen, Hui
Zhang, Rui
Adjie, Bayu
Yan, Yue-Hong
author_facet Shu, Jiang-Ping
Shang, Hui
Jin, Dongmei
Wei, Hong-Jin
Zhou, Xi-Le
Liu, Hong-Mei
Gu, Yu-Feng
Wang, Ying
Wang, Fa-Guo
Shen, Hui
Zhang, Rui
Adjie, Bayu
Yan, Yue-Hong
author_sort Shu, Jiang-Ping
collection PubMed
description Because synonymy treatment traditionally relies on morphological judgments, it usually causes many problems in species delimitation and in the biodiversity catalogue. For example, Diplopterygium simulans, which belongs to the Gleicheniaceae family, has been considered to be synonymous with D. glaucum or D. giganteum based mainly on the morphology of its pinna rachis and blade. In the absence of molecular evidence, these revisions remain doubtful. DNA barcoding, which is considered to be a powerful method for species-level identification, was employed to assess the genetic distance among 9 members of the Diplopterygium genus. The results indicate that D. simulans is an independent species rather than a synonymy of D. glaucum or D. giganteum. Moreover, phylogenetic analysis uncovered the sisterhood of D. simulans and D. cantonense, which is supported by their geographical distributions and morphological traits. Incorrect synonymy treatment is prevalent in the characterization of biological diversity, and our study proposes a convenient and effective method for validating synonym treatments and discovering cryptic species.
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spelling pubmed-53518382017-04-06 Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example Shu, Jiang-Ping Shang, Hui Jin, Dongmei Wei, Hong-Jin Zhou, Xi-Le Liu, Hong-Mei Gu, Yu-Feng Wang, Ying Wang, Fa-Guo Shen, Hui Zhang, Rui Adjie, Bayu Yan, Yue-Hong PLoS One Research Article Because synonymy treatment traditionally relies on morphological judgments, it usually causes many problems in species delimitation and in the biodiversity catalogue. For example, Diplopterygium simulans, which belongs to the Gleicheniaceae family, has been considered to be synonymous with D. glaucum or D. giganteum based mainly on the morphology of its pinna rachis and blade. In the absence of molecular evidence, these revisions remain doubtful. DNA barcoding, which is considered to be a powerful method for species-level identification, was employed to assess the genetic distance among 9 members of the Diplopterygium genus. The results indicate that D. simulans is an independent species rather than a synonymy of D. glaucum or D. giganteum. Moreover, phylogenetic analysis uncovered the sisterhood of D. simulans and D. cantonense, which is supported by their geographical distributions and morphological traits. Incorrect synonymy treatment is prevalent in the characterization of biological diversity, and our study proposes a convenient and effective method for validating synonym treatments and discovering cryptic species. Public Library of Science 2017-03-15 /pmc/articles/PMC5351838/ /pubmed/28296890 http://dx.doi.org/10.1371/journal.pone.0164604 Text en © 2017 Shu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Shu, Jiang-Ping
Shang, Hui
Jin, Dongmei
Wei, Hong-Jin
Zhou, Xi-Le
Liu, Hong-Mei
Gu, Yu-Feng
Wang, Ying
Wang, Fa-Guo
Shen, Hui
Zhang, Rui
Adjie, Bayu
Yan, Yue-Hong
Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
title Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
title_full Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
title_fullStr Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
title_full_unstemmed Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
title_short Re-establishment of species from synonymies based on DNA barcoding and phylogenetic analysis using Diplopterygium simulans (Gleicheniaceae) as an example
title_sort re-establishment of species from synonymies based on dna barcoding and phylogenetic analysis using diplopterygium simulans (gleicheniaceae) as an example
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351838/
https://www.ncbi.nlm.nih.gov/pubmed/28296890
http://dx.doi.org/10.1371/journal.pone.0164604
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