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Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy
Tobacco mosaic virus (TMV) is one of the most devastating viruses to crops, which can cause severe production loss and affect the quality of products. In this study, we have proposed a novel approach to discriminate TMV-infected tobacco based on laser-induced breakdown spectroscopy (LIBS). Two diffe...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5353609/ https://www.ncbi.nlm.nih.gov/pubmed/28300144 http://dx.doi.org/10.1038/srep44551 |
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author | Peng, Jiyu Song, Kunlin Zhu, Hongyan Kong, Wenwen Liu, Fei Shen, Tingting He, Yong |
author_facet | Peng, Jiyu Song, Kunlin Zhu, Hongyan Kong, Wenwen Liu, Fei Shen, Tingting He, Yong |
author_sort | Peng, Jiyu |
collection | PubMed |
description | Tobacco mosaic virus (TMV) is one of the most devastating viruses to crops, which can cause severe production loss and affect the quality of products. In this study, we have proposed a novel approach to discriminate TMV-infected tobacco based on laser-induced breakdown spectroscopy (LIBS). Two different kinds of tobacco samples (fresh leaves and dried leaf pellets) were collected for spectral acquisition, and partial least squared discrimination analysis (PLS-DA) was used to establish classification models based on full spectrum and observed emission lines. The influences of moisture content on spectral profile, signal stability and plasma parameters (temperature and electron density) were also analysed. The results revealed that moisture content in fresh tobacco leaves would worsen the stability of analysis, and have a detrimental effect on the classification results. Good classification results were achieved based on the data from both full spectrum and observed emission lines of dried leaves, approaching 97.2% and 88.9% in the prediction set, respectively. In addition, support vector machine (SVM) could improve the classification results and eliminate influences of moisture content. The preliminary results indicate that LIBS coupled with chemometrics could provide a fast, efficient and low-cost approach for TMV-infected disease detection in tobacco leaves. |
format | Online Article Text |
id | pubmed-5353609 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53536092017-03-20 Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy Peng, Jiyu Song, Kunlin Zhu, Hongyan Kong, Wenwen Liu, Fei Shen, Tingting He, Yong Sci Rep Article Tobacco mosaic virus (TMV) is one of the most devastating viruses to crops, which can cause severe production loss and affect the quality of products. In this study, we have proposed a novel approach to discriminate TMV-infected tobacco based on laser-induced breakdown spectroscopy (LIBS). Two different kinds of tobacco samples (fresh leaves and dried leaf pellets) were collected for spectral acquisition, and partial least squared discrimination analysis (PLS-DA) was used to establish classification models based on full spectrum and observed emission lines. The influences of moisture content on spectral profile, signal stability and plasma parameters (temperature and electron density) were also analysed. The results revealed that moisture content in fresh tobacco leaves would worsen the stability of analysis, and have a detrimental effect on the classification results. Good classification results were achieved based on the data from both full spectrum and observed emission lines of dried leaves, approaching 97.2% and 88.9% in the prediction set, respectively. In addition, support vector machine (SVM) could improve the classification results and eliminate influences of moisture content. The preliminary results indicate that LIBS coupled with chemometrics could provide a fast, efficient and low-cost approach for TMV-infected disease detection in tobacco leaves. Nature Publishing Group 2017-03-16 /pmc/articles/PMC5353609/ /pubmed/28300144 http://dx.doi.org/10.1038/srep44551 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Peng, Jiyu Song, Kunlin Zhu, Hongyan Kong, Wenwen Liu, Fei Shen, Tingting He, Yong Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
title | Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
title_full | Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
title_fullStr | Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
title_full_unstemmed | Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
title_short | Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
title_sort | fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5353609/ https://www.ncbi.nlm.nih.gov/pubmed/28300144 http://dx.doi.org/10.1038/srep44551 |
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