Cargando…

A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde

Vanillin and syringaldehyde obtained from lignin are essential intermediates for the production of basic chemicals using microbial cell factories. However, in contrast to vanillin, the microbial conversion of syringaldehyde is poorly understood. Here, we identified an aromatic aldehyde dehydrogenase...

Descripción completa

Detalles Bibliográficos
Autores principales: Kamimura, Naofumi, Goto, Takayuki, Takahashi, Kenji, Kasai, Daisuke, Otsuka, Yuichiro, Nakamura, Masaya, Katayama, Yoshihiro, Fukuda, Masao, Masai, Eiji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5353671/
https://www.ncbi.nlm.nih.gov/pubmed/28294121
http://dx.doi.org/10.1038/srep44422
_version_ 1782515164502818816
author Kamimura, Naofumi
Goto, Takayuki
Takahashi, Kenji
Kasai, Daisuke
Otsuka, Yuichiro
Nakamura, Masaya
Katayama, Yoshihiro
Fukuda, Masao
Masai, Eiji
author_facet Kamimura, Naofumi
Goto, Takayuki
Takahashi, Kenji
Kasai, Daisuke
Otsuka, Yuichiro
Nakamura, Masaya
Katayama, Yoshihiro
Fukuda, Masao
Masai, Eiji
author_sort Kamimura, Naofumi
collection PubMed
description Vanillin and syringaldehyde obtained from lignin are essential intermediates for the production of basic chemicals using microbial cell factories. However, in contrast to vanillin, the microbial conversion of syringaldehyde is poorly understood. Here, we identified an aromatic aldehyde dehydrogenase (ALDH) gene responsible for syringaldehyde catabolism from 20 putative ALDH genes of Sphingobium sp. strain SYK-6. All these genes were expressed in Escherichia coli, and nine gene products, including previously characterized BzaA, BzaB, and vanillin dehydrogenase (LigV), exhibited oxidation activities for syringaldehyde to produce syringate. Among these genes, SLG_28320 (desV) and ligV were most highly and constitutively transcribed in the SYK-6 cells. Disruption of desV in SYK-6 resulted in a significant reduction in growth on syringaldehyde and in syringaldehyde oxidation activity. Furthermore, a desV ligV double mutant almost completely lost its ability to grow on syringaldehyde. Purified DesV showed similar k(cat)/K(m) values for syringaldehyde (2100 s(−1)·mM(−1)) and vanillin (1700 s(−1)·mM(−1)), whereas LigV substantially preferred vanillin (8800 s(−1)·mM(−1)) over syringaldehyde (1.4 s(−1)·mM(−1)). These results clearly demonstrate that desV plays a major role in syringaldehyde catabolism. Phylogenetic analyses showed that DesV-like ALDHs formed a distinct phylogenetic cluster separated from the vanillin dehydrogenase cluster.
format Online
Article
Text
id pubmed-5353671
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-53536712017-03-20 A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde Kamimura, Naofumi Goto, Takayuki Takahashi, Kenji Kasai, Daisuke Otsuka, Yuichiro Nakamura, Masaya Katayama, Yoshihiro Fukuda, Masao Masai, Eiji Sci Rep Article Vanillin and syringaldehyde obtained from lignin are essential intermediates for the production of basic chemicals using microbial cell factories. However, in contrast to vanillin, the microbial conversion of syringaldehyde is poorly understood. Here, we identified an aromatic aldehyde dehydrogenase (ALDH) gene responsible for syringaldehyde catabolism from 20 putative ALDH genes of Sphingobium sp. strain SYK-6. All these genes were expressed in Escherichia coli, and nine gene products, including previously characterized BzaA, BzaB, and vanillin dehydrogenase (LigV), exhibited oxidation activities for syringaldehyde to produce syringate. Among these genes, SLG_28320 (desV) and ligV were most highly and constitutively transcribed in the SYK-6 cells. Disruption of desV in SYK-6 resulted in a significant reduction in growth on syringaldehyde and in syringaldehyde oxidation activity. Furthermore, a desV ligV double mutant almost completely lost its ability to grow on syringaldehyde. Purified DesV showed similar k(cat)/K(m) values for syringaldehyde (2100 s(−1)·mM(−1)) and vanillin (1700 s(−1)·mM(−1)), whereas LigV substantially preferred vanillin (8800 s(−1)·mM(−1)) over syringaldehyde (1.4 s(−1)·mM(−1)). These results clearly demonstrate that desV plays a major role in syringaldehyde catabolism. Phylogenetic analyses showed that DesV-like ALDHs formed a distinct phylogenetic cluster separated from the vanillin dehydrogenase cluster. Nature Publishing Group 2017-03-15 /pmc/articles/PMC5353671/ /pubmed/28294121 http://dx.doi.org/10.1038/srep44422 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Kamimura, Naofumi
Goto, Takayuki
Takahashi, Kenji
Kasai, Daisuke
Otsuka, Yuichiro
Nakamura, Masaya
Katayama, Yoshihiro
Fukuda, Masao
Masai, Eiji
A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
title A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
title_full A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
title_fullStr A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
title_full_unstemmed A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
title_short A bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
title_sort bacterial aromatic aldehyde dehydrogenase critical for the efficient catabolism of syringaldehyde
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5353671/
https://www.ncbi.nlm.nih.gov/pubmed/28294121
http://dx.doi.org/10.1038/srep44422
work_keys_str_mv AT kamimuranaofumi abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT gototakayuki abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT takahashikenji abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT kasaidaisuke abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT otsukayuichiro abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT nakamuramasaya abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT katayamayoshihiro abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT fukudamasao abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT masaieiji abacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT kamimuranaofumi bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT gototakayuki bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT takahashikenji bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT kasaidaisuke bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT otsukayuichiro bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT nakamuramasaya bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT katayamayoshihiro bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT fukudamasao bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde
AT masaieiji bacterialaromaticaldehydedehydrogenasecriticalfortheefficientcatabolismofsyringaldehyde