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Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing
State‐of‐the‐art health care includes genome sequencing of the patient to identify genetic variants that contribute to either the cause of their malady or variants that can be targeted to improve treatment. The goal was to introduce state‐of‐the‐art health care to cats using genomics and a precision...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354023/ https://www.ncbi.nlm.nih.gov/pubmed/28233346 http://dx.doi.org/10.1111/jvim.14599 |
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author | Mauler, D.A. Gandolfi, B. Reinero, C.R. O'Brien, D.P. Spooner, J.L. Lyons, L.A. Aberdein, Danielle Alves, Paulo C. Barsh, Gregory S. Beale, Holly C. Boyko, Adam R. Brockman, Jeffrey A. Castelhano, Marta G. Chan, Patricia P. Matthew Ellinwood, N. Fogle, Jonathan E. Garrick, Dorian J. Helps, Christopher R. Hytönen, Marjo K. Kaukonen, Maria Kaelin, Christopher B. Leclerc, Emilie Leeb, Tosso Lohi, Hannes Longeri, Maria Malik, Richard Montague, Michael J. Munday, John S. Murphy, William J. Pedersen, Niels C. Rothschild, Max F. Stern, Joshua A. Swanson, William F. Terio, Karen A. Todhunter, Rory J. Ueda, Yu Warren, Wesley C. Wilcox, Elizabeth A. Wildschutte, Julia H. |
author_facet | Mauler, D.A. Gandolfi, B. Reinero, C.R. O'Brien, D.P. Spooner, J.L. Lyons, L.A. Aberdein, Danielle Alves, Paulo C. Barsh, Gregory S. Beale, Holly C. Boyko, Adam R. Brockman, Jeffrey A. Castelhano, Marta G. Chan, Patricia P. Matthew Ellinwood, N. Fogle, Jonathan E. Garrick, Dorian J. Helps, Christopher R. Hytönen, Marjo K. Kaukonen, Maria Kaelin, Christopher B. Leclerc, Emilie Leeb, Tosso Lohi, Hannes Longeri, Maria Malik, Richard Montague, Michael J. Munday, John S. Murphy, William J. Pedersen, Niels C. Rothschild, Max F. Stern, Joshua A. Swanson, William F. Terio, Karen A. Todhunter, Rory J. Ueda, Yu Warren, Wesley C. Wilcox, Elizabeth A. Wildschutte, Julia H. |
author_sort | Mauler, D.A. |
collection | PubMed |
description | State‐of‐the‐art health care includes genome sequencing of the patient to identify genetic variants that contribute to either the cause of their malady or variants that can be targeted to improve treatment. The goal was to introduce state‐of‐the‐art health care to cats using genomics and a precision medicine approach. To test the feasibility of a precision medicine approach in domestic cats, a single cat that presented to the University of Missouri, Veterinary Health Center with an undiagnosed neurologic disease was whole‐genome sequenced. The DNA variants from the cat were compared to the DNA variant database produced by the 99 Lives Cat Genome Sequencing Consortium. Approximately 25× genomic coverage was produced for the cat. A predicted p.H441P missense mutation was identified in NPC1, the gene causing Niemann‐Pick type C1 on cat chromosome D3.47456793 caused by an adenine‐to‐cytosine transversion, c.1322A>C. The cat was homozygous for the variant. The variant was not identified in any other 73 domestic and 9 wild felids in the sequence database or 190 additionally genotyped cats of various breeds. The successful effort suggested precision medicine is feasible for cats and other undiagnosed cats may benefit from a genomic analysis approach. The 99 Lives DNA variant database was sufficient but would benefit from additional cat sequences. Other cats with the mutation may be identified and could be introduced as a new biomedical model for NPC1. A genetic test could eliminate the disease variant from the population. |
format | Online Article Text |
id | pubmed-5354023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-53540232017-03-22 Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing Mauler, D.A. Gandolfi, B. Reinero, C.R. O'Brien, D.P. Spooner, J.L. Lyons, L.A. Aberdein, Danielle Alves, Paulo C. Barsh, Gregory S. Beale, Holly C. Boyko, Adam R. Brockman, Jeffrey A. Castelhano, Marta G. Chan, Patricia P. Matthew Ellinwood, N. Fogle, Jonathan E. Garrick, Dorian J. Helps, Christopher R. Hytönen, Marjo K. Kaukonen, Maria Kaelin, Christopher B. Leclerc, Emilie Leeb, Tosso Lohi, Hannes Longeri, Maria Malik, Richard Montague, Michael J. Munday, John S. Murphy, William J. Pedersen, Niels C. Rothschild, Max F. Stern, Joshua A. Swanson, William F. Terio, Karen A. Todhunter, Rory J. Ueda, Yu Warren, Wesley C. Wilcox, Elizabeth A. Wildschutte, Julia H. J Vet Intern Med SMALL ANIMAL State‐of‐the‐art health care includes genome sequencing of the patient to identify genetic variants that contribute to either the cause of their malady or variants that can be targeted to improve treatment. The goal was to introduce state‐of‐the‐art health care to cats using genomics and a precision medicine approach. To test the feasibility of a precision medicine approach in domestic cats, a single cat that presented to the University of Missouri, Veterinary Health Center with an undiagnosed neurologic disease was whole‐genome sequenced. The DNA variants from the cat were compared to the DNA variant database produced by the 99 Lives Cat Genome Sequencing Consortium. Approximately 25× genomic coverage was produced for the cat. A predicted p.H441P missense mutation was identified in NPC1, the gene causing Niemann‐Pick type C1 on cat chromosome D3.47456793 caused by an adenine‐to‐cytosine transversion, c.1322A>C. The cat was homozygous for the variant. The variant was not identified in any other 73 domestic and 9 wild felids in the sequence database or 190 additionally genotyped cats of various breeds. The successful effort suggested precision medicine is feasible for cats and other undiagnosed cats may benefit from a genomic analysis approach. The 99 Lives DNA variant database was sufficient but would benefit from additional cat sequences. Other cats with the mutation may be identified and could be introduced as a new biomedical model for NPC1. A genetic test could eliminate the disease variant from the population. John Wiley and Sons Inc. 2017-02-24 2017 /pmc/articles/PMC5354023/ /pubmed/28233346 http://dx.doi.org/10.1111/jvim.14599 Text en Copyright © 2016 The Authors. Journal of Veterinary Internal Medicine published by Wiley Periodicals, Inc. on behalf of the American College of Veterinary Internal Medicine. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial (http://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | SMALL ANIMAL Mauler, D.A. Gandolfi, B. Reinero, C.R. O'Brien, D.P. Spooner, J.L. Lyons, L.A. Aberdein, Danielle Alves, Paulo C. Barsh, Gregory S. Beale, Holly C. Boyko, Adam R. Brockman, Jeffrey A. Castelhano, Marta G. Chan, Patricia P. Matthew Ellinwood, N. Fogle, Jonathan E. Garrick, Dorian J. Helps, Christopher R. Hytönen, Marjo K. Kaukonen, Maria Kaelin, Christopher B. Leclerc, Emilie Leeb, Tosso Lohi, Hannes Longeri, Maria Malik, Richard Montague, Michael J. Munday, John S. Murphy, William J. Pedersen, Niels C. Rothschild, Max F. Stern, Joshua A. Swanson, William F. Terio, Karen A. Todhunter, Rory J. Ueda, Yu Warren, Wesley C. Wilcox, Elizabeth A. Wildschutte, Julia H. Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing |
title | Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing |
title_full | Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing |
title_fullStr | Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing |
title_full_unstemmed | Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing |
title_short | Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing |
title_sort | precision medicine in cats: novel niemann‐pick type c1 diagnosed by whole‐genome sequencing |
topic | SMALL ANIMAL |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354023/ https://www.ncbi.nlm.nih.gov/pubmed/28233346 http://dx.doi.org/10.1111/jvim.14599 |
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