Cargando…
Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression
OBJECTIVE: We studied the role of the NC_000017.10:g.38051348A>G (rs8067378) single nucleotide polymorphism (SNP) located 9.5 kb downstream of gasdermin B (GSDMB), in the development and progression of cervical squamous cell carcinomas (SCC). METHODS: Using high-resolution melting curve analysis,...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5355524/ https://www.ncbi.nlm.nih.gov/pubmed/28120299 http://dx.doi.org/10.1007/s40291-017-0256-1 |
_version_ | 1782515592233746432 |
---|---|
author | Lutkowska, Anna Roszak, Andrzej Lianeri, Margarita Sowińska, Anna Sotiri, Emianka Jagodziński, Pawel P. |
author_facet | Lutkowska, Anna Roszak, Andrzej Lianeri, Margarita Sowińska, Anna Sotiri, Emianka Jagodziński, Pawel P. |
author_sort | Lutkowska, Anna |
collection | PubMed |
description | OBJECTIVE: We studied the role of the NC_000017.10:g.38051348A>G (rs8067378) single nucleotide polymorphism (SNP) located 9.5 kb downstream of gasdermin B (GSDMB), in the development and progression of cervical squamous cell carcinomas (SCC). METHODS: Using high-resolution melting curve analysis, we genotyped this SNP in patients with cervical SCC (n = 486) and controls (n = 511) from the Polish Caucasian population. Logistic regression analysis was used to adjust for the effect of confounders such as age, parity, oral contraceptive use, tobacco smoking, and menopausal status. The effect of this SNP on the expression of GSDMB was studied by reverse transcription and quantitative real-time polymerase chain reaction analysis of GSDMB transcript levels in SCC tissues. RESULTS: For all patients with SCC, the p trend value calculated for rs8067378 was statistically significant (p (trend) = 0.0019). The adjusted odds ratio for the G/G vs. A/A genotype was 1.304 (95% confidence interval 1.080–1.574, p = 0.0057) and the adjusted odds ratio for the G/A + G/G vs. A/A genotype was 1.444 (95% confidence interval 1.064–1.959, p = 0.0181). We also found a significant association of the rs8067378 SNP with tumor stages III, IV, and grade of differentiation G3, and with parity, oral contraceptive use, smoking, and women of postmenopausal age. We found increased GSDMB1 isoform transcripts in the cancerous and non-cancerous tissues from carriers of the G allele vs. carriers of the A/A genotype. CONCLUSIONS: The rs8067378 SNP variants may increase the expression of GSDMB and the risk of the development and progression of cervical SCC. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s40291-017-0256-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5355524 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-53555242017-03-28 Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression Lutkowska, Anna Roszak, Andrzej Lianeri, Margarita Sowińska, Anna Sotiri, Emianka Jagodziński, Pawel P. Mol Diagn Ther Original Research Article OBJECTIVE: We studied the role of the NC_000017.10:g.38051348A>G (rs8067378) single nucleotide polymorphism (SNP) located 9.5 kb downstream of gasdermin B (GSDMB), in the development and progression of cervical squamous cell carcinomas (SCC). METHODS: Using high-resolution melting curve analysis, we genotyped this SNP in patients with cervical SCC (n = 486) and controls (n = 511) from the Polish Caucasian population. Logistic regression analysis was used to adjust for the effect of confounders such as age, parity, oral contraceptive use, tobacco smoking, and menopausal status. The effect of this SNP on the expression of GSDMB was studied by reverse transcription and quantitative real-time polymerase chain reaction analysis of GSDMB transcript levels in SCC tissues. RESULTS: For all patients with SCC, the p trend value calculated for rs8067378 was statistically significant (p (trend) = 0.0019). The adjusted odds ratio for the G/G vs. A/A genotype was 1.304 (95% confidence interval 1.080–1.574, p = 0.0057) and the adjusted odds ratio for the G/A + G/G vs. A/A genotype was 1.444 (95% confidence interval 1.064–1.959, p = 0.0181). We also found a significant association of the rs8067378 SNP with tumor stages III, IV, and grade of differentiation G3, and with parity, oral contraceptive use, smoking, and women of postmenopausal age. We found increased GSDMB1 isoform transcripts in the cancerous and non-cancerous tissues from carriers of the G allele vs. carriers of the A/A genotype. CONCLUSIONS: The rs8067378 SNP variants may increase the expression of GSDMB and the risk of the development and progression of cervical SCC. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s40291-017-0256-1) contains supplementary material, which is available to authorized users. Springer International Publishing 2017-01-25 2017 /pmc/articles/PMC5355524/ /pubmed/28120299 http://dx.doi.org/10.1007/s40291-017-0256-1 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/), which permits any noncommercial use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Original Research Article Lutkowska, Anna Roszak, Andrzej Lianeri, Margarita Sowińska, Anna Sotiri, Emianka Jagodziński, Pawel P. Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression |
title | Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression |
title_full | Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression |
title_fullStr | Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression |
title_full_unstemmed | Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression |
title_short | Analysis of rs8067378 Polymorphism in the Risk of Uterine Cervical Cancer from a Polish Population and its Impact on Gasdermin B Expression |
title_sort | analysis of rs8067378 polymorphism in the risk of uterine cervical cancer from a polish population and its impact on gasdermin b expression |
topic | Original Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5355524/ https://www.ncbi.nlm.nih.gov/pubmed/28120299 http://dx.doi.org/10.1007/s40291-017-0256-1 |
work_keys_str_mv | AT lutkowskaanna analysisofrs8067378polymorphismintheriskofuterinecervicalcancerfromapolishpopulationanditsimpactongasderminbexpression AT roszakandrzej analysisofrs8067378polymorphismintheriskofuterinecervicalcancerfromapolishpopulationanditsimpactongasderminbexpression AT lianerimargarita analysisofrs8067378polymorphismintheriskofuterinecervicalcancerfromapolishpopulationanditsimpactongasderminbexpression AT sowinskaanna analysisofrs8067378polymorphismintheriskofuterinecervicalcancerfromapolishpopulationanditsimpactongasderminbexpression AT sotiriemianka analysisofrs8067378polymorphismintheriskofuterinecervicalcancerfromapolishpopulationanditsimpactongasderminbexpression AT jagodzinskipawelp analysisofrs8067378polymorphismintheriskofuterinecervicalcancerfromapolishpopulationanditsimpactongasderminbexpression |