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Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations
Many practical systems can be described by dynamic networks, for which modern technique can measure their outputs, and accumulate extremely rich data. Nevertheless, the network structures producing these data are often deeply hidden in the data. The problem of inferring network structures by analyzi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359559/ https://www.ncbi.nlm.nih.gov/pubmed/28322230 http://dx.doi.org/10.1038/srep44639 |
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author | Chen, Yang Zhang, Zhaoyang Chen, Tianyu Wang, Shihong Hu, Gang |
author_facet | Chen, Yang Zhang, Zhaoyang Chen, Tianyu Wang, Shihong Hu, Gang |
author_sort | Chen, Yang |
collection | PubMed |
description | Many practical systems can be described by dynamic networks, for which modern technique can measure their outputs, and accumulate extremely rich data. Nevertheless, the network structures producing these data are often deeply hidden in the data. The problem of inferring network structures by analyzing the available data, turns to be of great significance. On one hand, networks are often driven by various unknown facts, such as noises. On the other hand, network structures of practical systems are commonly nonlinear, and different nonlinearities can provide rich dynamic features and meaningful functions of realistic networks. Although many works have considered each fact in studying network reconstructions, much less papers have been found to systematically treat both difficulties together. Here we propose to use high-order correlation computations (HOCC) to treat nonlinear dynamics; use two-time correlations to decorrelate effects of network dynamics and noise driving; and use suitable basis and correlator vectors to unifiedly infer all dynamic nonlinearities, topological interaction links and noise statistical structures. All the above theoretical frameworks are constructed in a closed form and numerical simulations fully verify the validity of theoretical predictions. |
format | Online Article Text |
id | pubmed-5359559 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53595592017-03-22 Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations Chen, Yang Zhang, Zhaoyang Chen, Tianyu Wang, Shihong Hu, Gang Sci Rep Article Many practical systems can be described by dynamic networks, for which modern technique can measure their outputs, and accumulate extremely rich data. Nevertheless, the network structures producing these data are often deeply hidden in the data. The problem of inferring network structures by analyzing the available data, turns to be of great significance. On one hand, networks are often driven by various unknown facts, such as noises. On the other hand, network structures of practical systems are commonly nonlinear, and different nonlinearities can provide rich dynamic features and meaningful functions of realistic networks. Although many works have considered each fact in studying network reconstructions, much less papers have been found to systematically treat both difficulties together. Here we propose to use high-order correlation computations (HOCC) to treat nonlinear dynamics; use two-time correlations to decorrelate effects of network dynamics and noise driving; and use suitable basis and correlator vectors to unifiedly infer all dynamic nonlinearities, topological interaction links and noise statistical structures. All the above theoretical frameworks are constructed in a closed form and numerical simulations fully verify the validity of theoretical predictions. Nature Publishing Group 2017-03-21 /pmc/articles/PMC5359559/ /pubmed/28322230 http://dx.doi.org/10.1038/srep44639 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Chen, Yang Zhang, Zhaoyang Chen, Tianyu Wang, Shihong Hu, Gang Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
title | Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
title_full | Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
title_fullStr | Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
title_full_unstemmed | Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
title_short | Reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
title_sort | reconstruction of noise-driven nonlinear networks from node outputs by using high-order correlations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359559/ https://www.ncbi.nlm.nih.gov/pubmed/28322230 http://dx.doi.org/10.1038/srep44639 |
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