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Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions
High abundance and widespread distribution of the archaeal phylum Bathyarchaeota in marine environment have been recognized recently, but knowledge about Bathyarchaeota in terrestrial settings and their correlation with environmental parameters is fairly limited. Here we reported the abundance of Ba...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359579/ https://www.ncbi.nlm.nih.gov/pubmed/28322330 http://dx.doi.org/10.1038/srep45028 |
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author | Xiang, Xing Wang, Ruicheng Wang, Hongmei Gong, Linfeng Man, Baiying Xu, Ying |
author_facet | Xiang, Xing Wang, Ruicheng Wang, Hongmei Gong, Linfeng Man, Baiying Xu, Ying |
author_sort | Xiang, Xing |
collection | PubMed |
description | High abundance and widespread distribution of the archaeal phylum Bathyarchaeota in marine environment have been recognized recently, but knowledge about Bathyarchaeota in terrestrial settings and their correlation with environmental parameters is fairly limited. Here we reported the abundance of Bathyarchaeota members across different ecosystems and their correlation with environmental factors by constructing 16S rRNA clone libraries of peat from the Dajiuhu Peatland, coupling with bioinformatics analysis of 16S rRNA data available to date in NCBI database. In total, 1456 Bathyarchaeota sequences from 28 sites were subjected to UniFrac analysis based on phylogenetic distance and multivariate regression tree analysis of taxonomy. Both phylogenetic and taxon-based approaches showed that salinity, total organic carbon and temperature significantly influenced the distribution of Bathyarchaeota across different terrestrial habitats. By applying the ecological concept of ‘indicator species’, we identify 9 indicator groups among the 6 habitats with the most in the estuary sediments. Network analysis showed that members of Bathyarchaeota formed the “backbone” of archaeal community and often co-occurred with Methanomicrobia. These results suggest that Bathyarchaeota may play an important ecological role within archaeal communities via a potential symbiotic association with Methanomicrobia. Our results shed light on understanding of the biogeography, potential functions of Bathyarchaeota and environment conditions that influence Bathyarchaea distribution in terrestrial settings. |
format | Online Article Text |
id | pubmed-5359579 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53595792017-03-22 Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions Xiang, Xing Wang, Ruicheng Wang, Hongmei Gong, Linfeng Man, Baiying Xu, Ying Sci Rep Article High abundance and widespread distribution of the archaeal phylum Bathyarchaeota in marine environment have been recognized recently, but knowledge about Bathyarchaeota in terrestrial settings and their correlation with environmental parameters is fairly limited. Here we reported the abundance of Bathyarchaeota members across different ecosystems and their correlation with environmental factors by constructing 16S rRNA clone libraries of peat from the Dajiuhu Peatland, coupling with bioinformatics analysis of 16S rRNA data available to date in NCBI database. In total, 1456 Bathyarchaeota sequences from 28 sites were subjected to UniFrac analysis based on phylogenetic distance and multivariate regression tree analysis of taxonomy. Both phylogenetic and taxon-based approaches showed that salinity, total organic carbon and temperature significantly influenced the distribution of Bathyarchaeota across different terrestrial habitats. By applying the ecological concept of ‘indicator species’, we identify 9 indicator groups among the 6 habitats with the most in the estuary sediments. Network analysis showed that members of Bathyarchaeota formed the “backbone” of archaeal community and often co-occurred with Methanomicrobia. These results suggest that Bathyarchaeota may play an important ecological role within archaeal communities via a potential symbiotic association with Methanomicrobia. Our results shed light on understanding of the biogeography, potential functions of Bathyarchaeota and environment conditions that influence Bathyarchaea distribution in terrestrial settings. Nature Publishing Group 2017-03-21 /pmc/articles/PMC5359579/ /pubmed/28322330 http://dx.doi.org/10.1038/srep45028 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Xiang, Xing Wang, Ruicheng Wang, Hongmei Gong, Linfeng Man, Baiying Xu, Ying Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions |
title | Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions |
title_full | Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions |
title_fullStr | Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions |
title_full_unstemmed | Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions |
title_short | Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions |
title_sort | distribution of bathyarchaeota communities across different terrestrial settings and their potential ecological functions |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359579/ https://www.ncbi.nlm.nih.gov/pubmed/28322330 http://dx.doi.org/10.1038/srep45028 |
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