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Identification of animal movement patterns using tri-axial magnetometry

BACKGROUND: Accelerometers are powerful sensors in many bio-logging devices, and are increasingly allowing researchers to investigate the performance, behaviour, energy expenditure and even state, of free-living animals. Another sensor commonly used in animal-attached loggers is the magnetometer, wh...

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Autores principales: Williams, Hannah J., Holton, Mark D., Shepard, Emily L. C., Largey, Nicola, Norman, Brad, Ryan, Peter G., Duriez, Olivier, Scantlebury, Michael, Quintana, Flavio, Magowan, Elizabeth A., Marks, Nikki J., Alagaili, Abdulaziz N., Bennett, Nigel C., Wilson, Rory P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367006/
https://www.ncbi.nlm.nih.gov/pubmed/28357113
http://dx.doi.org/10.1186/s40462-017-0097-x
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author Williams, Hannah J.
Holton, Mark D.
Shepard, Emily L. C.
Largey, Nicola
Norman, Brad
Ryan, Peter G.
Duriez, Olivier
Scantlebury, Michael
Quintana, Flavio
Magowan, Elizabeth A.
Marks, Nikki J.
Alagaili, Abdulaziz N.
Bennett, Nigel C.
Wilson, Rory P.
author_facet Williams, Hannah J.
Holton, Mark D.
Shepard, Emily L. C.
Largey, Nicola
Norman, Brad
Ryan, Peter G.
Duriez, Olivier
Scantlebury, Michael
Quintana, Flavio
Magowan, Elizabeth A.
Marks, Nikki J.
Alagaili, Abdulaziz N.
Bennett, Nigel C.
Wilson, Rory P.
author_sort Williams, Hannah J.
collection PubMed
description BACKGROUND: Accelerometers are powerful sensors in many bio-logging devices, and are increasingly allowing researchers to investigate the performance, behaviour, energy expenditure and even state, of free-living animals. Another sensor commonly used in animal-attached loggers is the magnetometer, which has been primarily used in dead-reckoning or inertial measurement tags, but little outside that. We examine the potential of magnetometers for helping elucidate the behaviour of animals in a manner analogous to, but very different from, accelerometers. The particular responses of magnetometers to movement means that there are instances when they can resolve behaviours that are not easily perceived using accelerometers. METHODS: We calibrated the tri-axial magnetometer to rotations in each axis of movement and constructed 3-dimensional plots to inspect these stylised movements. Using the tri-axial data of Daily Diary tags, attached to individuals of number of animal species as they perform different behaviours, we used these 3-d plots to develop a framework with which tri-axial magnetometry data can be examined and introduce metrics that should help quantify movement and behaviour. RESULTS: Tri-axial magnetometry data reveal patterns in movement at various scales of rotation that are not always evident in acceleration data. Some of these patterns may be obscure until visualised in 3D space as tri-axial spherical plots (m-spheres). A tag-fitted animal that rotates in heading while adopting a constant body attitude produces a ring of data around the pole of the m-sphere that we define as its Normal Operational Plane (NOP). Data that do not lie on this ring are created by postural rotations of the animal as it pitches and/or rolls. Consequently, stereotyped behaviours appear as specific trajectories on the sphere (m-prints), reflecting conserved sequences of postural changes (and/or angular velocities), which result from the precise relationship between body attitude and heading. This novel approach shows promise for helping researchers to identify and quantify behaviours in terms of animal body posture, including heading. CONCLUSION: Magnetometer-based techniques and metrics can enhance our capacity to identify and examine animal behaviour, either as a technique used alone, or one that is complementary to tri-axial accelerometry. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40462-017-0097-x) contains supplementary material, which is available to authorized users.
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spelling pubmed-53670062017-03-29 Identification of animal movement patterns using tri-axial magnetometry Williams, Hannah J. Holton, Mark D. Shepard, Emily L. C. Largey, Nicola Norman, Brad Ryan, Peter G. Duriez, Olivier Scantlebury, Michael Quintana, Flavio Magowan, Elizabeth A. Marks, Nikki J. Alagaili, Abdulaziz N. Bennett, Nigel C. Wilson, Rory P. Mov Ecol Methodology Article BACKGROUND: Accelerometers are powerful sensors in many bio-logging devices, and are increasingly allowing researchers to investigate the performance, behaviour, energy expenditure and even state, of free-living animals. Another sensor commonly used in animal-attached loggers is the magnetometer, which has been primarily used in dead-reckoning or inertial measurement tags, but little outside that. We examine the potential of magnetometers for helping elucidate the behaviour of animals in a manner analogous to, but very different from, accelerometers. The particular responses of magnetometers to movement means that there are instances when they can resolve behaviours that are not easily perceived using accelerometers. METHODS: We calibrated the tri-axial magnetometer to rotations in each axis of movement and constructed 3-dimensional plots to inspect these stylised movements. Using the tri-axial data of Daily Diary tags, attached to individuals of number of animal species as they perform different behaviours, we used these 3-d plots to develop a framework with which tri-axial magnetometry data can be examined and introduce metrics that should help quantify movement and behaviour. RESULTS: Tri-axial magnetometry data reveal patterns in movement at various scales of rotation that are not always evident in acceleration data. Some of these patterns may be obscure until visualised in 3D space as tri-axial spherical plots (m-spheres). A tag-fitted animal that rotates in heading while adopting a constant body attitude produces a ring of data around the pole of the m-sphere that we define as its Normal Operational Plane (NOP). Data that do not lie on this ring are created by postural rotations of the animal as it pitches and/or rolls. Consequently, stereotyped behaviours appear as specific trajectories on the sphere (m-prints), reflecting conserved sequences of postural changes (and/or angular velocities), which result from the precise relationship between body attitude and heading. This novel approach shows promise for helping researchers to identify and quantify behaviours in terms of animal body posture, including heading. CONCLUSION: Magnetometer-based techniques and metrics can enhance our capacity to identify and examine animal behaviour, either as a technique used alone, or one that is complementary to tri-axial accelerometry. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40462-017-0097-x) contains supplementary material, which is available to authorized users. BioMed Central 2017-03-27 /pmc/articles/PMC5367006/ /pubmed/28357113 http://dx.doi.org/10.1186/s40462-017-0097-x Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology Article
Williams, Hannah J.
Holton, Mark D.
Shepard, Emily L. C.
Largey, Nicola
Norman, Brad
Ryan, Peter G.
Duriez, Olivier
Scantlebury, Michael
Quintana, Flavio
Magowan, Elizabeth A.
Marks, Nikki J.
Alagaili, Abdulaziz N.
Bennett, Nigel C.
Wilson, Rory P.
Identification of animal movement patterns using tri-axial magnetometry
title Identification of animal movement patterns using tri-axial magnetometry
title_full Identification of animal movement patterns using tri-axial magnetometry
title_fullStr Identification of animal movement patterns using tri-axial magnetometry
title_full_unstemmed Identification of animal movement patterns using tri-axial magnetometry
title_short Identification of animal movement patterns using tri-axial magnetometry
title_sort identification of animal movement patterns using tri-axial magnetometry
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367006/
https://www.ncbi.nlm.nih.gov/pubmed/28357113
http://dx.doi.org/10.1186/s40462-017-0097-x
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