Cargando…
Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker)
Light is an important environmental signal for most insects. The Oriental Armyworm, Mythimna separata, is a serious pest of cereal crops worldwide, and is highly sensitive to light signals during its developmental and reproductive stages. However, molecular biological studies of its response to ligh...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367045/ https://www.ncbi.nlm.nih.gov/pubmed/28345615 http://dx.doi.org/10.1038/srep45188 |
_version_ | 1782517703491190784 |
---|---|
author | Duan, Yun Gong, ZhongJun Wu, RenHai Miao, Jin Jiang, YueLi Li, Tong Wu, XiaoBo Wu, YuQing |
author_facet | Duan, Yun Gong, ZhongJun Wu, RenHai Miao, Jin Jiang, YueLi Li, Tong Wu, XiaoBo Wu, YuQing |
author_sort | Duan, Yun |
collection | PubMed |
description | Light is an important environmental signal for most insects. The Oriental Armyworm, Mythimna separata, is a serious pest of cereal crops worldwide, and is highly sensitive to light signals during its developmental and reproductive stages. However, molecular biological studies of its response to light stress are scarce, and related genomic information is not available. In this study, we sequenced and de novo assembled the transcriptomes of M. separata exposed to four different light conditions: dark, white light (WL), UV light (UVL) and yellow light (YL). A total of 46,327 unigenes with an average size of 571 base pairs (bp) were obtained, among which 24,344 (52.55%) matched to public databases. The numbers of genes differentially expressed between dark vs WL, dark vs UVL, dark vs YL, and UVL vs YL were 12,012, 12,950, 14,855, and 13,504, respectively. These results suggest that light exposure altered gene expression patterns in M. separata. Putative genes involved in phototransduction-fly, phototransduction, circadian rhythm-fly, olfactory transduction, and taste transduction were identified. This study thus identified a series of candidate genes and pathways potentially related to light stress in M. separata. |
format | Online Article Text |
id | pubmed-5367045 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53670452017-03-28 Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) Duan, Yun Gong, ZhongJun Wu, RenHai Miao, Jin Jiang, YueLi Li, Tong Wu, XiaoBo Wu, YuQing Sci Rep Article Light is an important environmental signal for most insects. The Oriental Armyworm, Mythimna separata, is a serious pest of cereal crops worldwide, and is highly sensitive to light signals during its developmental and reproductive stages. However, molecular biological studies of its response to light stress are scarce, and related genomic information is not available. In this study, we sequenced and de novo assembled the transcriptomes of M. separata exposed to four different light conditions: dark, white light (WL), UV light (UVL) and yellow light (YL). A total of 46,327 unigenes with an average size of 571 base pairs (bp) were obtained, among which 24,344 (52.55%) matched to public databases. The numbers of genes differentially expressed between dark vs WL, dark vs UVL, dark vs YL, and UVL vs YL were 12,012, 12,950, 14,855, and 13,504, respectively. These results suggest that light exposure altered gene expression patterns in M. separata. Putative genes involved in phototransduction-fly, phototransduction, circadian rhythm-fly, olfactory transduction, and taste transduction were identified. This study thus identified a series of candidate genes and pathways potentially related to light stress in M. separata. Nature Publishing Group 2017-03-27 /pmc/articles/PMC5367045/ /pubmed/28345615 http://dx.doi.org/10.1038/srep45188 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Duan, Yun Gong, ZhongJun Wu, RenHai Miao, Jin Jiang, YueLi Li, Tong Wu, XiaoBo Wu, YuQing Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) |
title | Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) |
title_full | Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) |
title_fullStr | Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) |
title_full_unstemmed | Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) |
title_short | Transcriptome analysis of molecular mechanisms responsible for light-stress response in Mythimna separata (Walker) |
title_sort | transcriptome analysis of molecular mechanisms responsible for light-stress response in mythimna separata (walker) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367045/ https://www.ncbi.nlm.nih.gov/pubmed/28345615 http://dx.doi.org/10.1038/srep45188 |
work_keys_str_mv | AT duanyun transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT gongzhongjun transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT wurenhai transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT miaojin transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT jiangyueli transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT litong transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT wuxiaobo transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker AT wuyuqing transcriptomeanalysisofmolecularmechanismsresponsibleforlightstressresponseinmythimnaseparatawalker |