Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli

Here, we provide the dataset associated with our research article on the polyphosphate metabolism entitled, “Multi-level evaluation of Escherichia coli polyphosphate related mutants using global transcriptomic, proteomic and phenomic analyses”. By integrating different omics levels (transcriptome, p...

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Autores principales: Varas, Macarena, Valdivieso, Camilo, Mauriaca, Cecilia, Ortíz-Severín, Javiera, Paradela, Alberto, Poblete-Castro, Ignacio, Cabrera, Ricardo, Chávez, Francisco P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Data Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367803/
https://www.ncbi.nlm.nih.gov/pubmed/28373998
http://dx.doi.org/10.1016/j.dib.2017.03.010
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author Varas, Macarena
Valdivieso, Camilo
Mauriaca, Cecilia
Ortíz-Severín, Javiera
Paradela, Alberto
Poblete-Castro, Ignacio
Cabrera, Ricardo
Chávez, Francisco P.
author_facet Varas, Macarena
Valdivieso, Camilo
Mauriaca, Cecilia
Ortíz-Severín, Javiera
Paradela, Alberto
Poblete-Castro, Ignacio
Cabrera, Ricardo
Chávez, Francisco P.
author_sort Varas, Macarena
collection PubMed
description Here, we provide the dataset associated with our research article on the polyphosphate metabolism entitled, “Multi-level evaluation of Escherichia coli polyphosphate related mutants using global transcriptomic, proteomic and phenomic analyses”. By integrating different omics levels (transcriptome, proteome and phenome), we were able to study Escherichia coli polyphosphate mutant strains (Δppk1, Δppx, and Δppk1-ppx). We have compiled here all datasets from DNA microarrys, q-proteomic (Isotope-Coded Protein Labeling, ICPL) and phenomic (Phenotype microarray) raw data we have obtained in all polyP metabolism mutants.
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spelling pubmed-53678032017-04-03 Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli Varas, Macarena Valdivieso, Camilo Mauriaca, Cecilia Ortíz-Severín, Javiera Paradela, Alberto Poblete-Castro, Ignacio Cabrera, Ricardo Chávez, Francisco P. Data Brief Data Article Here, we provide the dataset associated with our research article on the polyphosphate metabolism entitled, “Multi-level evaluation of Escherichia coli polyphosphate related mutants using global transcriptomic, proteomic and phenomic analyses”. By integrating different omics levels (transcriptome, proteome and phenome), we were able to study Escherichia coli polyphosphate mutant strains (Δppk1, Δppx, and Δppk1-ppx). We have compiled here all datasets from DNA microarrys, q-proteomic (Isotope-Coded Protein Labeling, ICPL) and phenomic (Phenotype microarray) raw data we have obtained in all polyP metabolism mutants. Elsevier 2017-03-18 /pmc/articles/PMC5367803/ /pubmed/28373998 http://dx.doi.org/10.1016/j.dib.2017.03.010 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Varas, Macarena
Valdivieso, Camilo
Mauriaca, Cecilia
Ortíz-Severín, Javiera
Paradela, Alberto
Poblete-Castro, Ignacio
Cabrera, Ricardo
Chávez, Francisco P.
Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli
title Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli
title_full Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli
title_fullStr Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli
title_full_unstemmed Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli
title_short Datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from Escherichia coli
title_sort datasets for transcriptomics, q-proteomics and phenotype microarrays of polyphosphate metabolism mutants from escherichia coli
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367803/
https://www.ncbi.nlm.nih.gov/pubmed/28373998
http://dx.doi.org/10.1016/j.dib.2017.03.010
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