Cargando…

Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas

BACKGROUND: IRAK1 has been repoted to play an essential role in the development of multiple cancers. However, the clinical significance of IRAK1 in hepatocellular carcinoma (HCC) and the underlying molecular mechanism remain unclear. Therefore, we aimed to investigate the role of IRAK1 in the pathog...

Descripción completa

Detalles Bibliográficos
Autores principales: Ye, Zhi-hua, Gao, Li, Wen, Dong-yue, He, Yun, Pang, Yu-yan, Chen, Gang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove Medical Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367901/
https://www.ncbi.nlm.nih.gov/pubmed/28356759
http://dx.doi.org/10.2147/OTT.S132120
_version_ 1782517852023029760
author Ye, Zhi-hua
Gao, Li
Wen, Dong-yue
He, Yun
Pang, Yu-yan
Chen, Gang
author_facet Ye, Zhi-hua
Gao, Li
Wen, Dong-yue
He, Yun
Pang, Yu-yan
Chen, Gang
author_sort Ye, Zhi-hua
collection PubMed
description BACKGROUND: IRAK1 has been repoted to play an essential role in the development of multiple cancers. However, the clinical significance of IRAK1 in hepatocellular carcinoma (HCC) and the underlying molecular mechanism remain unclear. Therefore, we aimed to investigate the role of IRAK1 in the pathogenesis of HCC in this study. MATERIALS AND METHODS: HCC tissues and para-carcinoma tissues were collected for immunohistochemistry (IHC) analysis to evaluate IRAK1 expression. Data of IRAK1 expression were downloaded from the cancer genome atlas (TCGA) for analyzing the clinical significance of IRAK1. Receiver operating characteristic (ROC) curve and survival analyses were carried out to assess the diagnostic and prognostic significance of IRAK1 in IHC and TCGA data. Additionally, we investigated the alteration of IRAK1 gene in HCC from cBioPortal to generate a network of the interaction between IRAK1 and the neighboring genes. The influence of IRAK1 gene alteration on the prognosis of HCC patients was evaluated by survival analysis. RESULTS: Analysis of both IHC and TCGA data revealed a significant upregulation of IRAK1 in HCC tissues. The IHC analysis revealed there was an increasing trend in IRAK1 expression among normal liver tissues, liver cirrhosis tissues, para-carcinoma tissues and HCC tissues. The ROC curves for IHC and TCGA data demonstrated that IRAK1 exhibited a significant diagnostic value for HCC. Moreover, IRAK1 expression was observed to be associated with tumor size, metastasis and T-stage. The survival analysis indicated that the upregulation of IRAK1 predicted a worse overall survival of HCC. Additionally, data from cBioPortal confirmed that 29% of HCC tissues possessed an alteration of the IRAK1 gene. CONCLUSION: IRAK1 may act as an oncogene in the development of HCC with its overexpression in HCC. Moreover, IRAK1 might serve as a promising diagnostic and therapeutic target for HCC.
format Online
Article
Text
id pubmed-5367901
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Dove Medical Press
record_format MEDLINE/PubMed
spelling pubmed-53679012017-03-29 Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas Ye, Zhi-hua Gao, Li Wen, Dong-yue He, Yun Pang, Yu-yan Chen, Gang Onco Targets Ther Original Research BACKGROUND: IRAK1 has been repoted to play an essential role in the development of multiple cancers. However, the clinical significance of IRAK1 in hepatocellular carcinoma (HCC) and the underlying molecular mechanism remain unclear. Therefore, we aimed to investigate the role of IRAK1 in the pathogenesis of HCC in this study. MATERIALS AND METHODS: HCC tissues and para-carcinoma tissues were collected for immunohistochemistry (IHC) analysis to evaluate IRAK1 expression. Data of IRAK1 expression were downloaded from the cancer genome atlas (TCGA) for analyzing the clinical significance of IRAK1. Receiver operating characteristic (ROC) curve and survival analyses were carried out to assess the diagnostic and prognostic significance of IRAK1 in IHC and TCGA data. Additionally, we investigated the alteration of IRAK1 gene in HCC from cBioPortal to generate a network of the interaction between IRAK1 and the neighboring genes. The influence of IRAK1 gene alteration on the prognosis of HCC patients was evaluated by survival analysis. RESULTS: Analysis of both IHC and TCGA data revealed a significant upregulation of IRAK1 in HCC tissues. The IHC analysis revealed there was an increasing trend in IRAK1 expression among normal liver tissues, liver cirrhosis tissues, para-carcinoma tissues and HCC tissues. The ROC curves for IHC and TCGA data demonstrated that IRAK1 exhibited a significant diagnostic value for HCC. Moreover, IRAK1 expression was observed to be associated with tumor size, metastasis and T-stage. The survival analysis indicated that the upregulation of IRAK1 predicted a worse overall survival of HCC. Additionally, data from cBioPortal confirmed that 29% of HCC tissues possessed an alteration of the IRAK1 gene. CONCLUSION: IRAK1 may act as an oncogene in the development of HCC with its overexpression in HCC. Moreover, IRAK1 might serve as a promising diagnostic and therapeutic target for HCC. Dove Medical Press 2017-03-21 /pmc/articles/PMC5367901/ /pubmed/28356759 http://dx.doi.org/10.2147/OTT.S132120 Text en © 2017 Ye et al. This work is published and licensed by Dove Medical Press Limited The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed.
spellingShingle Original Research
Ye, Zhi-hua
Gao, Li
Wen, Dong-yue
He, Yun
Pang, Yu-yan
Chen, Gang
Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas
title Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas
title_full Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas
title_fullStr Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas
title_full_unstemmed Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas
title_short Diagnostic and prognostic roles of IRAK1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and RNA-sequencing data from the cancer genome atlas
title_sort diagnostic and prognostic roles of irak1 in hepatocellular carcinoma tissues: an analysis of immunohistochemistry and rna-sequencing data from the cancer genome atlas
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367901/
https://www.ncbi.nlm.nih.gov/pubmed/28356759
http://dx.doi.org/10.2147/OTT.S132120
work_keys_str_mv AT yezhihua diagnosticandprognosticrolesofirak1inhepatocellularcarcinomatissuesananalysisofimmunohistochemistryandrnasequencingdatafromthecancergenomeatlas
AT gaoli diagnosticandprognosticrolesofirak1inhepatocellularcarcinomatissuesananalysisofimmunohistochemistryandrnasequencingdatafromthecancergenomeatlas
AT wendongyue diagnosticandprognosticrolesofirak1inhepatocellularcarcinomatissuesananalysisofimmunohistochemistryandrnasequencingdatafromthecancergenomeatlas
AT heyun diagnosticandprognosticrolesofirak1inhepatocellularcarcinomatissuesananalysisofimmunohistochemistryandrnasequencingdatafromthecancergenomeatlas
AT pangyuyan diagnosticandprognosticrolesofirak1inhepatocellularcarcinomatissuesananalysisofimmunohistochemistryandrnasequencingdatafromthecancergenomeatlas
AT chengang diagnosticandprognosticrolesofirak1inhepatocellularcarcinomatissuesananalysisofimmunohistochemistryandrnasequencingdatafromthecancergenomeatlas