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A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel

While the typical Arabian camel is characterized by a single colored coat, there are rare populations with white spotting patterns. White spotting coat patterns are found in virtually all domesticated species, but are rare in wild species. Theories suggest that white spotting is linked to the domest...

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Autores principales: Holl, Heather, Isaza, Ramiro, Mohamoud, Yasmin, Ahmed, Ayeda, Almathen, Faisal, Youcef, Cherifi, Gaouar, Semir, Antczak, Douglas F., Brooks, Samantha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5368706/
https://www.ncbi.nlm.nih.gov/pubmed/28282952
http://dx.doi.org/10.3390/genes8030102
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author Holl, Heather
Isaza, Ramiro
Mohamoud, Yasmin
Ahmed, Ayeda
Almathen, Faisal
Youcef, Cherifi
Gaouar, Semir
Antczak, Douglas F.
Brooks, Samantha
author_facet Holl, Heather
Isaza, Ramiro
Mohamoud, Yasmin
Ahmed, Ayeda
Almathen, Faisal
Youcef, Cherifi
Gaouar, Semir
Antczak, Douglas F.
Brooks, Samantha
author_sort Holl, Heather
collection PubMed
description While the typical Arabian camel is characterized by a single colored coat, there are rare populations with white spotting patterns. White spotting coat patterns are found in virtually all domesticated species, but are rare in wild species. Theories suggest that white spotting is linked to the domestication process, and is occasionally associated with health disorders. Though mutations have been found in a diverse array of species, fewer than 30 genes have been associated with spotting patterns, thus providing a key set of candidate genes for the Arabian camel. We obtained 26 spotted camels and 24 solid controls for candidate gene analysis. One spotted and eight solid camels were whole genome sequenced as part of a separate project. The spotted camel was heterozygous for a frameshift deletion in KIT (c.1842delG, named KIT(W1) for White spotting 1), whereas all other camels were wild-type (KIT(+)/KIT(+)). No additional mutations unique to the spotted camel were detected in the EDNRB, EDN3, SOX10, KITLG, PDGFRA, MITF, and PAX3 candidate white spotting genes. Sanger sequencing of the study population identified an additional five KIT(W1)/KIT(+) spotted camels. The frameshift results in a premature stop codon five amino acids downstream, thus terminating KIT at the tyrosine kinase domain. An additional 13 spotted camels tested KIT(+)/KIT(+), but due to phenotypic differences when compared to the KIT(W1)/KIT(+) camels, they likely represent an independent mutation. Our study suggests that there are at least two causes of white spotting in the Arabian camel, the newly described KIT(W1) allele and an uncharacterized mutation.
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spelling pubmed-53687062017-04-05 A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel Holl, Heather Isaza, Ramiro Mohamoud, Yasmin Ahmed, Ayeda Almathen, Faisal Youcef, Cherifi Gaouar, Semir Antczak, Douglas F. Brooks, Samantha Genes (Basel) Article While the typical Arabian camel is characterized by a single colored coat, there are rare populations with white spotting patterns. White spotting coat patterns are found in virtually all domesticated species, but are rare in wild species. Theories suggest that white spotting is linked to the domestication process, and is occasionally associated with health disorders. Though mutations have been found in a diverse array of species, fewer than 30 genes have been associated with spotting patterns, thus providing a key set of candidate genes for the Arabian camel. We obtained 26 spotted camels and 24 solid controls for candidate gene analysis. One spotted and eight solid camels were whole genome sequenced as part of a separate project. The spotted camel was heterozygous for a frameshift deletion in KIT (c.1842delG, named KIT(W1) for White spotting 1), whereas all other camels were wild-type (KIT(+)/KIT(+)). No additional mutations unique to the spotted camel were detected in the EDNRB, EDN3, SOX10, KITLG, PDGFRA, MITF, and PAX3 candidate white spotting genes. Sanger sequencing of the study population identified an additional five KIT(W1)/KIT(+) spotted camels. The frameshift results in a premature stop codon five amino acids downstream, thus terminating KIT at the tyrosine kinase domain. An additional 13 spotted camels tested KIT(+)/KIT(+), but due to phenotypic differences when compared to the KIT(W1)/KIT(+) camels, they likely represent an independent mutation. Our study suggests that there are at least two causes of white spotting in the Arabian camel, the newly described KIT(W1) allele and an uncharacterized mutation. MDPI 2017-03-09 /pmc/articles/PMC5368706/ /pubmed/28282952 http://dx.doi.org/10.3390/genes8030102 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Holl, Heather
Isaza, Ramiro
Mohamoud, Yasmin
Ahmed, Ayeda
Almathen, Faisal
Youcef, Cherifi
Gaouar, Semir
Antczak, Douglas F.
Brooks, Samantha
A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel
title A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel
title_full A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel
title_fullStr A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel
title_full_unstemmed A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel
title_short A Frameshift Mutation in KIT is Associated with White Spotting in the Arabian Camel
title_sort frameshift mutation in kit is associated with white spotting in the arabian camel
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5368706/
https://www.ncbi.nlm.nih.gov/pubmed/28282952
http://dx.doi.org/10.3390/genes8030102
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