Cargando…

RNA Sequencing Identifies New RNase III Cleavage Sites in Escherichia coli and Reveals Increased Regulation of mRNA

Ribonucleases facilitate rapid turnover of RNA, providing cells with another mechanism to adjust transcript and protein levels in response to environmental conditions. While many examples have been documented, a comprehensive list of RNase targets is not available. To address this knowledge gap, we...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gordon, Gina C., Cameron, Jeffrey C., Pfleger, Brian F.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2017
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371410/ https://www.ncbi.nlm.nih.gov/pubmed/28351917 http://dx.doi.org/10.1128/mBio.00128-17

Ejemplares similares

Two Tandem RNase III Cleavage Sites Determine betT mRNA Stability in Response to Osmotic Stress in Escherichia coli
por: Sim, Minji, et al.
Publicado: (2014)

Distinct and redundant functions of three homologs of RNase III in the cyanobacterium Synechococcus sp. strain PCC 7002
por: Gordon, Gina C, et al.
Publicado: (2018)

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli
por: Altuvia, Yael, et al.
Publicado: (2018)

In vivo cleavage rules and target repertoire of RNase III in Escherichia coli
por: Altuvia, Yael, et al.
Publicado: (2018)

Importance of residue 248 in Escherichia coli RNase P RNA mediated cleavage
por: Mao, Guanzhong, et al.
Publicado: (2023)

Short RNA Guides Cleavage by Eukaryotic RNase III
por: Lamontagne, Bruno, et al.
Publicado: (2007)

Sequence-specific cleavage of dsRNA by Mini-III RNase
por: Głów, Dawid, et al.
Publicado: (2015)

Substrate discrimination in RNase P RNA-mediated cleavage: importance of the structural environment of the RNase P cleavage site
por: Kikovska, Ema, et al.
Publicado: (2005)

Artificial small RNA for sequence specific cleavage of target RNA through RNase III endonuclease Dicer
por: Xu, Wen, et al.
Publicado: (2016)

Functional interaction between RNase III and the Escherichia coli ribosome
por: Allas, Ülar, et al.
Publicado: (2003)

Regulation of morphological differentiation in S. coelicolor by RNase III (AbsB) cleavage of mRNA encoding the AdpA transcription factor
por: Xu, Weijing, et al.
Publicado: (2010)

Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays
por: Stead, Mark B., et al.
Publicado: (2011)

sRNA-mediated regulation of gal mRNA in E. coli: Involvement of transcript cleavage by RNase E together with Rho-dependent transcription termination
por: Jeon, Heung Jin, et al.
Publicado: (2021)

RNase III cleavage demonstrates a long range RNA: RNA duplex element flanking the hepatitis C virus internal ribosome entry site
por: Beguiristain, Nerea, et al.
Publicado: (2005)

The coordinated action of RNase III and RNase G controls enolase expression in response to oxygen availability in Escherichia coli
por: Lee, Minho, et al.
Publicado: (2019)

Studies on Escherichia coli RNase P RNA with Zn(2+) as the catalytic cofactor
por: Cuzic, Simona, et al.
Publicado: (2005)

The Escherichia coli major exoribonuclease RNase II is a component of the RNA degradosome
por: Lu, Feng, et al.
Publicado: (2014)

Genome sequence and analysis of Escherichia coli production strain LS5218
por: Rand, Jacqueline M., et al.
Publicado: (2017)

Intragenic suppressors of temperature-sensitive rne mutations lead to the dissociation of RNase E activity on mRNA and tRNA substrates in Escherichia coli
por: Perwez, Tariq, et al.
Publicado: (2008)

Stress-induced inhibition of mRNA export triggers RNase III-mediated decay of the BDF2 mRNA
por: Wang, Charles, et al.
Publicado: (2021)

Examining tRNA 3′-ends in Escherichia coli: teamwork between CCA-adding enzyme, RNase T, and RNase R
por: Wellner, Karolin, et al.
Publicado: (2018)

RNase III Participates in the Adaptation to Temperature Shock and Oxidative Stress in Escherichia coli
por: Lejars, Maxence, et al.
Publicado: (2022)

RNase E-dependent degradation of tnaA mRNA encoding tryptophanase is prerequisite for the induction of acid resistance in Escherichia coli
por: Kanda, Takeshi, et al.
Publicado: (2020)

sRNA-dependent control of curli biosynthesis in Escherichia coli: McaS directs endonucleolytic cleavage of csgD mRNA
por: Andreassen, Patrick Rosendahl, et al.
Publicado: (2018)

Mini-III RNase-based dual-color system for in vivo mRNA tracking
por: Zhang, Lin, et al.
Publicado: (2020)

The Crystal Structure of the Escherichia coli RNase E Apoprotein and a Mechanism for RNA Degradation
por: Koslover, Daniel J., et al.
Publicado: (2008)

Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB
por: Afonyushkin, Taras, et al.
Publicado: (2005)

Not making the cut: Techniques to prevent RNA cleavage in structural studies of RNase–RNA complexes
por: Jones, Seth P., et al.
Publicado: (2022)

Compatible Pollinations in Solanum chacoense Decrease Both S-RNase and S-RNase mRNA
por: Liu, Bolin, et al.
Publicado: (2009)

Endonucleolytic cleavages by RNase E generate the mature 3′ termini of the three proline tRNAs in Escherichia coli
por: Mohanty, Bijoy K., et al.
Publicado: (2016)

Cleavage mediated by the P15 domain of bacterial RNase P RNA
por: Kikovska, Ema, et al.
Publicado: (2012)

Rapid cleavage of RNA by RNase E in the absence of 5′ monophosphate stimulation
por: Kime, Louise, et al.
Publicado: (2010)

Site-Specific Cleavage of Ribosomal RNA in Escherichia coli-Based Cell-Free Protein Synthesis Systems
por: Failmezger, Jurek, et al.
Publicado: (2016)

Antibiotic stress-induced modulation of the endoribonucleolytic activity of RNase III and RNase G confers resistance to aminoglycoside antibiotics in Escherichia coli
por: Song, Wooseok, et al.
Publicado: (2014)

Identifying RNA N(6)-Methyladenosine Sites in Escherichia coli Genome
por: Zhang, Jidong, et al.
Publicado: (2018)

Direct entry by RNase E is a major pathway for the degradation and processing of RNA in Escherichia coli
por: Clarke, Justin E., et al.
Publicado: (2014)

A-Site mRNA Cleavage Is Not Required for tmRNA-Mediated ssrA-Peptide Tagging
por: Janssen, Brian D., et al.
Publicado: (2013)

Cleavage of model substrates by archaeal RNase P: role of protein cofactors in cleavage-site selection
por: Sinapah, Sylvie, et al.
Publicado: (2011)

Argonaute-based programmable RNase as a tool for cleavage of highly-structured RNA
por: Dayeh, Daniel M, et al.
Publicado: (2018)

Escherichia coli RNase E can efficiently replace RNase Y in Bacillus subtilis
por: Laalami, Soumaya, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_6509u1r1knkskrocn82fqaer9v