Cargando…

Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)

Due to its high biomass yield, low environmental impact, and widespread adaptability to poor soils and harsh conditions, switchgrass (Panicum virgatum L.), a warm-region perennial herbaceous plant, has attracted much attention in recent years. However, little is known about microRNAs (miRNAs) and th...

Descripción completa

Detalles Bibliográficos
Autores principales: Xie, Qi, Liu, Xue, Zhang, Yinbing, Tang, Jinfu, Yin, Dedong, Fan, Bo, Zhu, Lihuang, Han, Liebao, Song, Guilong, Li, Dayong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371612/
https://www.ncbi.nlm.nih.gov/pubmed/28424710
http://dx.doi.org/10.3389/fpls.2017.00396
_version_ 1782518454279995392
author Xie, Qi
Liu, Xue
Zhang, Yinbing
Tang, Jinfu
Yin, Dedong
Fan, Bo
Zhu, Lihuang
Han, Liebao
Song, Guilong
Li, Dayong
author_facet Xie, Qi
Liu, Xue
Zhang, Yinbing
Tang, Jinfu
Yin, Dedong
Fan, Bo
Zhu, Lihuang
Han, Liebao
Song, Guilong
Li, Dayong
author_sort Xie, Qi
collection PubMed
description Due to its high biomass yield, low environmental impact, and widespread adaptability to poor soils and harsh conditions, switchgrass (Panicum virgatum L.), a warm-region perennial herbaceous plant, has attracted much attention in recent years. However, little is known about microRNAs (miRNAs) and their functions in this bioenergy grass. Here, we identified and characterized a miRNA gene, Pvi-MIR319a, encoding microRNA319a in switchgrass. Transgenic rice lines generated by overexpressing the Pvi-MIR319a precursor gene exhibited broader leaves and delayed flowering compared with the control. Gene expression analysis indicated at least four putative target genes were downregulated. Additionally, we cloned a putative target gene (PvPCF5) of Pvi-MIR319a from switchgrass. PvPCF5, a TCP transcription factor, is a nuclear-localized protein with transactivation activity and control the development of leaf. Our results suggest that Pvi-MIR319a and its target genes may be used as potential genetic regulators for future switchgrass genetic improvement.
format Online
Article
Text
id pubmed-5371612
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-53716122017-04-19 Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum) Xie, Qi Liu, Xue Zhang, Yinbing Tang, Jinfu Yin, Dedong Fan, Bo Zhu, Lihuang Han, Liebao Song, Guilong Li, Dayong Front Plant Sci Plant Science Due to its high biomass yield, low environmental impact, and widespread adaptability to poor soils and harsh conditions, switchgrass (Panicum virgatum L.), a warm-region perennial herbaceous plant, has attracted much attention in recent years. However, little is known about microRNAs (miRNAs) and their functions in this bioenergy grass. Here, we identified and characterized a miRNA gene, Pvi-MIR319a, encoding microRNA319a in switchgrass. Transgenic rice lines generated by overexpressing the Pvi-MIR319a precursor gene exhibited broader leaves and delayed flowering compared with the control. Gene expression analysis indicated at least four putative target genes were downregulated. Additionally, we cloned a putative target gene (PvPCF5) of Pvi-MIR319a from switchgrass. PvPCF5, a TCP transcription factor, is a nuclear-localized protein with transactivation activity and control the development of leaf. Our results suggest that Pvi-MIR319a and its target genes may be used as potential genetic regulators for future switchgrass genetic improvement. Frontiers Media S.A. 2017-03-30 /pmc/articles/PMC5371612/ /pubmed/28424710 http://dx.doi.org/10.3389/fpls.2017.00396 Text en Copyright © 2017 Xie, Liu, Zhang, Tang, Yin, Fan, Zhu, Han, Song and Li. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Xie, Qi
Liu, Xue
Zhang, Yinbing
Tang, Jinfu
Yin, Dedong
Fan, Bo
Zhu, Lihuang
Han, Liebao
Song, Guilong
Li, Dayong
Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)
title Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)
title_full Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)
title_fullStr Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)
title_full_unstemmed Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)
title_short Identification and Characterization of microRNA319a and Its Putative Target Gene, PvPCF5, in the Bioenergy Grass Switchgrass (Panicum virgatum)
title_sort identification and characterization of microrna319a and its putative target gene, pvpcf5, in the bioenergy grass switchgrass (panicum virgatum)
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371612/
https://www.ncbi.nlm.nih.gov/pubmed/28424710
http://dx.doi.org/10.3389/fpls.2017.00396
work_keys_str_mv AT xieqi identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT liuxue identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT zhangyinbing identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT tangjinfu identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT yindedong identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT fanbo identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT zhulihuang identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT hanliebao identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT songguilong identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum
AT lidayong identificationandcharacterizationofmicrorna319aanditsputativetargetgenepvpcf5inthebioenergygrassswitchgrasspanicumvirgatum