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Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study

The effect of ion binding on the structural, mechanical, dynamic and electrostatic properties of a 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) bilayer in a 0.5 M aqueous NaCl solution is investigated using classical atomistic molecular dynamics simulation with different force-field descr...

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Autores principales: Reif, Maria M., Kallies, Christopher, Knecht, Volker
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371966/
https://www.ncbi.nlm.nih.gov/pubmed/28125062
http://dx.doi.org/10.3390/membranes7010005
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author Reif, Maria M.
Kallies, Christopher
Knecht, Volker
author_facet Reif, Maria M.
Kallies, Christopher
Knecht, Volker
author_sort Reif, Maria M.
collection PubMed
description The effect of ion binding on the structural, mechanical, dynamic and electrostatic properties of a 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) bilayer in a 0.5 M aqueous NaCl solution is investigated using classical atomistic molecular dynamics simulation with different force-field descriptions for ion-ion and ion-lipid interactions. Most importantly, the repulsive Lennard–Jones parameters for the latter were modified, such that approximately similar binding of cations and anions to the lipid membrane is achieved. This was done to qualitatively improve the apparent ion-lipid binding constants obtained from simulations with the original force field (Berger lipids and GROMOS87 ions in combination with the SPC water model) in comparison to experimental data. Furthermore, various parameters characterizing membrane structure, elasticity, order and dynamics are analyzed. It is found that ion binding as observed in simulations involving the modified in comparison to the original force-field description leads to: (i) a smaller salt-induced change in the area per lipid, which is in closer agreement with the experiment; (ii) a decrease in the area compressibility and bilayer thickness to values comparable to a bilayer in pure water; (iii) lipid deuterium order parameters and lipid diffusion coefficients on nanosecond timescales that are very similar to the values for a membrane in pure water. In general, salt effects on the structural properties of a POPC bilayer in an aqueous sodium-chloride solution appear to be reproduced reasonably well by the new force-field description. An analysis of membrane-membrane disjoining pressure suggests that the smaller salt-induced change in area per lipid induced by the new force-field description is not due to the alteration of membrane-associated net charge, but must rather be understood as a consequence of ion-specific effects on the arrangement of lipid molecules.
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spelling pubmed-53719662017-04-10 Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study Reif, Maria M. Kallies, Christopher Knecht, Volker Membranes (Basel) Article The effect of ion binding on the structural, mechanical, dynamic and electrostatic properties of a 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) bilayer in a 0.5 M aqueous NaCl solution is investigated using classical atomistic molecular dynamics simulation with different force-field descriptions for ion-ion and ion-lipid interactions. Most importantly, the repulsive Lennard–Jones parameters for the latter were modified, such that approximately similar binding of cations and anions to the lipid membrane is achieved. This was done to qualitatively improve the apparent ion-lipid binding constants obtained from simulations with the original force field (Berger lipids and GROMOS87 ions in combination with the SPC water model) in comparison to experimental data. Furthermore, various parameters characterizing membrane structure, elasticity, order and dynamics are analyzed. It is found that ion binding as observed in simulations involving the modified in comparison to the original force-field description leads to: (i) a smaller salt-induced change in the area per lipid, which is in closer agreement with the experiment; (ii) a decrease in the area compressibility and bilayer thickness to values comparable to a bilayer in pure water; (iii) lipid deuterium order parameters and lipid diffusion coefficients on nanosecond timescales that are very similar to the values for a membrane in pure water. In general, salt effects on the structural properties of a POPC bilayer in an aqueous sodium-chloride solution appear to be reproduced reasonably well by the new force-field description. An analysis of membrane-membrane disjoining pressure suggests that the smaller salt-induced change in area per lipid induced by the new force-field description is not due to the alteration of membrane-associated net charge, but must rather be understood as a consequence of ion-specific effects on the arrangement of lipid molecules. MDPI 2017-01-25 /pmc/articles/PMC5371966/ /pubmed/28125062 http://dx.doi.org/10.3390/membranes7010005 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Reif, Maria M.
Kallies, Christopher
Knecht, Volker
Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study
title Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study
title_full Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study
title_fullStr Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study
title_full_unstemmed Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study
title_short Effect of Sodium and Chloride Binding on a Lecithin Bilayer. A Molecular Dynamics Study
title_sort effect of sodium and chloride binding on a lecithin bilayer. a molecular dynamics study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371966/
https://www.ncbi.nlm.nih.gov/pubmed/28125062
http://dx.doi.org/10.3390/membranes7010005
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