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Study of lung cancer regulatory network that involves erbB4 and tumor marker gene

Our purpose is to screen out serum tumor markers closely correlated to the nature of solitary pulmonary nodule (SPN) and to draw a regulatory network containing genes correlated to lung cancer. Two hundred and sixty cases of SPN patients confirmed through pathological diagnosis were collected as sub...

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Autores principales: Ma, Xuhui, Li, Lu, Tian, Tongde, Liu, Huaimin, Li, Qiujian, Gao, Qilong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5372390/
https://www.ncbi.nlm.nih.gov/pubmed/28386192
http://dx.doi.org/10.1016/j.sjbs.2017.01.038
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author Ma, Xuhui
Li, Lu
Tian, Tongde
Liu, Huaimin
Li, Qiujian
Gao, Qilong
author_facet Ma, Xuhui
Li, Lu
Tian, Tongde
Liu, Huaimin
Li, Qiujian
Gao, Qilong
author_sort Ma, Xuhui
collection PubMed
description Our purpose is to screen out serum tumor markers closely correlated to the nature of solitary pulmonary nodule (SPN) and to draw a regulatory network containing genes correlated to lung cancer. Two hundred and sixty cases of SPN patients confirmed through pathological diagnosis were collected as subjects, factors closely correlated to the nature of SPN were screened out from eight tumor markers through Fisher discriminant method, and functional annotation and pathway analysis were conducted on erbB4 as well as its tumor marker genes by GO and KEGG databases. Four key tumor markers: CYFRA21-1, CA125, SCC-Ag and CA153 were successfully screened out and the first three proteins’ corresponding gene were KRT19, MUC16 and SERPINB3 while that of CA153 was not found. GO analysis on erbB4, KRT19, MUC16 and SERPINB3 showed that they covered three domains, cell components, molecular function and biological process; meanwhile, combined with KEGG database and based on signal pathway of erbB4, a regulatory network of lung cancer cells escaping from apoptosis was successfully made. This study indicates that serum tumor marker genes play an important role in the occurrence and development of lung cancer, besides, this study primarily discussed the molecular mechanism of these tumor markers in predicting tumor, which provides a basis for in-depth information about lung cancer.
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spelling pubmed-53723902017-04-06 Study of lung cancer regulatory network that involves erbB4 and tumor marker gene Ma, Xuhui Li, Lu Tian, Tongde Liu, Huaimin Li, Qiujian Gao, Qilong Saudi J Biol Sci Original Article Our purpose is to screen out serum tumor markers closely correlated to the nature of solitary pulmonary nodule (SPN) and to draw a regulatory network containing genes correlated to lung cancer. Two hundred and sixty cases of SPN patients confirmed through pathological diagnosis were collected as subjects, factors closely correlated to the nature of SPN were screened out from eight tumor markers through Fisher discriminant method, and functional annotation and pathway analysis were conducted on erbB4 as well as its tumor marker genes by GO and KEGG databases. Four key tumor markers: CYFRA21-1, CA125, SCC-Ag and CA153 were successfully screened out and the first three proteins’ corresponding gene were KRT19, MUC16 and SERPINB3 while that of CA153 was not found. GO analysis on erbB4, KRT19, MUC16 and SERPINB3 showed that they covered three domains, cell components, molecular function and biological process; meanwhile, combined with KEGG database and based on signal pathway of erbB4, a regulatory network of lung cancer cells escaping from apoptosis was successfully made. This study indicates that serum tumor marker genes play an important role in the occurrence and development of lung cancer, besides, this study primarily discussed the molecular mechanism of these tumor markers in predicting tumor, which provides a basis for in-depth information about lung cancer. Elsevier 2017-03 2017-01-27 /pmc/articles/PMC5372390/ /pubmed/28386192 http://dx.doi.org/10.1016/j.sjbs.2017.01.038 Text en © 2017 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Ma, Xuhui
Li, Lu
Tian, Tongde
Liu, Huaimin
Li, Qiujian
Gao, Qilong
Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
title Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
title_full Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
title_fullStr Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
title_full_unstemmed Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
title_short Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
title_sort study of lung cancer regulatory network that involves erbb4 and tumor marker gene
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5372390/
https://www.ncbi.nlm.nih.gov/pubmed/28386192
http://dx.doi.org/10.1016/j.sjbs.2017.01.038
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