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Study of lung cancer regulatory network that involves erbB4 and tumor marker gene
Our purpose is to screen out serum tumor markers closely correlated to the nature of solitary pulmonary nodule (SPN) and to draw a regulatory network containing genes correlated to lung cancer. Two hundred and sixty cases of SPN patients confirmed through pathological diagnosis were collected as sub...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5372390/ https://www.ncbi.nlm.nih.gov/pubmed/28386192 http://dx.doi.org/10.1016/j.sjbs.2017.01.038 |
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author | Ma, Xuhui Li, Lu Tian, Tongde Liu, Huaimin Li, Qiujian Gao, Qilong |
author_facet | Ma, Xuhui Li, Lu Tian, Tongde Liu, Huaimin Li, Qiujian Gao, Qilong |
author_sort | Ma, Xuhui |
collection | PubMed |
description | Our purpose is to screen out serum tumor markers closely correlated to the nature of solitary pulmonary nodule (SPN) and to draw a regulatory network containing genes correlated to lung cancer. Two hundred and sixty cases of SPN patients confirmed through pathological diagnosis were collected as subjects, factors closely correlated to the nature of SPN were screened out from eight tumor markers through Fisher discriminant method, and functional annotation and pathway analysis were conducted on erbB4 as well as its tumor marker genes by GO and KEGG databases. Four key tumor markers: CYFRA21-1, CA125, SCC-Ag and CA153 were successfully screened out and the first three proteins’ corresponding gene were KRT19, MUC16 and SERPINB3 while that of CA153 was not found. GO analysis on erbB4, KRT19, MUC16 and SERPINB3 showed that they covered three domains, cell components, molecular function and biological process; meanwhile, combined with KEGG database and based on signal pathway of erbB4, a regulatory network of lung cancer cells escaping from apoptosis was successfully made. This study indicates that serum tumor marker genes play an important role in the occurrence and development of lung cancer, besides, this study primarily discussed the molecular mechanism of these tumor markers in predicting tumor, which provides a basis for in-depth information about lung cancer. |
format | Online Article Text |
id | pubmed-5372390 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-53723902017-04-06 Study of lung cancer regulatory network that involves erbB4 and tumor marker gene Ma, Xuhui Li, Lu Tian, Tongde Liu, Huaimin Li, Qiujian Gao, Qilong Saudi J Biol Sci Original Article Our purpose is to screen out serum tumor markers closely correlated to the nature of solitary pulmonary nodule (SPN) and to draw a regulatory network containing genes correlated to lung cancer. Two hundred and sixty cases of SPN patients confirmed through pathological diagnosis were collected as subjects, factors closely correlated to the nature of SPN were screened out from eight tumor markers through Fisher discriminant method, and functional annotation and pathway analysis were conducted on erbB4 as well as its tumor marker genes by GO and KEGG databases. Four key tumor markers: CYFRA21-1, CA125, SCC-Ag and CA153 were successfully screened out and the first three proteins’ corresponding gene were KRT19, MUC16 and SERPINB3 while that of CA153 was not found. GO analysis on erbB4, KRT19, MUC16 and SERPINB3 showed that they covered three domains, cell components, molecular function and biological process; meanwhile, combined with KEGG database and based on signal pathway of erbB4, a regulatory network of lung cancer cells escaping from apoptosis was successfully made. This study indicates that serum tumor marker genes play an important role in the occurrence and development of lung cancer, besides, this study primarily discussed the molecular mechanism of these tumor markers in predicting tumor, which provides a basis for in-depth information about lung cancer. Elsevier 2017-03 2017-01-27 /pmc/articles/PMC5372390/ /pubmed/28386192 http://dx.doi.org/10.1016/j.sjbs.2017.01.038 Text en © 2017 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Ma, Xuhui Li, Lu Tian, Tongde Liu, Huaimin Li, Qiujian Gao, Qilong Study of lung cancer regulatory network that involves erbB4 and tumor marker gene |
title | Study of lung cancer regulatory network that involves erbB4 and tumor marker gene |
title_full | Study of lung cancer regulatory network that involves erbB4 and tumor marker gene |
title_fullStr | Study of lung cancer regulatory network that involves erbB4 and tumor marker gene |
title_full_unstemmed | Study of lung cancer regulatory network that involves erbB4 and tumor marker gene |
title_short | Study of lung cancer regulatory network that involves erbB4 and tumor marker gene |
title_sort | study of lung cancer regulatory network that involves erbb4 and tumor marker gene |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5372390/ https://www.ncbi.nlm.nih.gov/pubmed/28386192 http://dx.doi.org/10.1016/j.sjbs.2017.01.038 |
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