Cargando…

Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase

The α-amylases from Anoxybacillus species (ASKA and ADTA), Bacillus aquimaris (BaqA) and Geobacillus thermoleovorans (GTA, Pizzo and GtamyII) were proposed as a novel group of the α-amylase family GH13. An ASKA yielding a high percentage of maltose upon its reaction on starch was chosen as a model t...

Descripción completa

Detalles Bibliográficos
Autores principales: Ranjani, Velayudhan, Janeček, Štefan, Chai, Kian Piaw, Shahir, Shafinaz, Rahman, Raja Noor Zaliha Raja Abdul, Chan, Kok-Gan, Goh, Kian Mau
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5376179/
https://www.ncbi.nlm.nih.gov/pubmed/25069018
http://dx.doi.org/10.1038/srep05850
_version_ 1782519116466225152
author Ranjani, Velayudhan
Janeček, Štefan
Chai, Kian Piaw
Shahir, Shafinaz
Rahman, Raja Noor Zaliha Raja Abdul
Chan, Kok-Gan
Goh, Kian Mau
author_facet Ranjani, Velayudhan
Janeček, Štefan
Chai, Kian Piaw
Shahir, Shafinaz
Rahman, Raja Noor Zaliha Raja Abdul
Chan, Kok-Gan
Goh, Kian Mau
author_sort Ranjani, Velayudhan
collection PubMed
description The α-amylases from Anoxybacillus species (ASKA and ADTA), Bacillus aquimaris (BaqA) and Geobacillus thermoleovorans (GTA, Pizzo and GtamyII) were proposed as a novel group of the α-amylase family GH13. An ASKA yielding a high percentage of maltose upon its reaction on starch was chosen as a model to study the residues responsible for the biochemical properties. Four residues from conserved sequence regions (CSRs) were thus selected, and the mutants F113V (CSR-I), Y187F and L189I (CSR-II) and A161D (CSR-V) were characterised. Few changes in the optimum reaction temperature and pH were observed for all mutants. Whereas the Y187F (t(1/2) 43 h) and L189I (t(1/2) 36 h) mutants had a lower thermostability at 65°C than the native ASKA (t(1/2) 48 h), the mutants F113V and A161D exhibited an improved t(1/2) of 51 h and 53 h, respectively. Among the mutants, only the A161D had a specific activity, k(cat) and k(cat)/K(m) higher (1.23-, 1.17- and 2.88-times, respectively) than the values determined for the ASKA. The replacement of the Ala-161 in the CSR-V with an aspartic acid also caused a significant reduction in the ratio of maltose formed. This finding suggests the Ala-161 may contribute to the high maltose production of the ASKA.
format Online
Article
Text
id pubmed-5376179
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-53761792017-04-03 Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase Ranjani, Velayudhan Janeček, Štefan Chai, Kian Piaw Shahir, Shafinaz Rahman, Raja Noor Zaliha Raja Abdul Chan, Kok-Gan Goh, Kian Mau Sci Rep Article The α-amylases from Anoxybacillus species (ASKA and ADTA), Bacillus aquimaris (BaqA) and Geobacillus thermoleovorans (GTA, Pizzo and GtamyII) were proposed as a novel group of the α-amylase family GH13. An ASKA yielding a high percentage of maltose upon its reaction on starch was chosen as a model to study the residues responsible for the biochemical properties. Four residues from conserved sequence regions (CSRs) were thus selected, and the mutants F113V (CSR-I), Y187F and L189I (CSR-II) and A161D (CSR-V) were characterised. Few changes in the optimum reaction temperature and pH were observed for all mutants. Whereas the Y187F (t(1/2) 43 h) and L189I (t(1/2) 36 h) mutants had a lower thermostability at 65°C than the native ASKA (t(1/2) 48 h), the mutants F113V and A161D exhibited an improved t(1/2) of 51 h and 53 h, respectively. Among the mutants, only the A161D had a specific activity, k(cat) and k(cat)/K(m) higher (1.23-, 1.17- and 2.88-times, respectively) than the values determined for the ASKA. The replacement of the Ala-161 in the CSR-V with an aspartic acid also caused a significant reduction in the ratio of maltose formed. This finding suggests the Ala-161 may contribute to the high maltose production of the ASKA. Nature Publishing Group 2014-07-28 /pmc/articles/PMC5376179/ /pubmed/25069018 http://dx.doi.org/10.1038/srep05850 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
spellingShingle Article
Ranjani, Velayudhan
Janeček, Štefan
Chai, Kian Piaw
Shahir, Shafinaz
Rahman, Raja Noor Zaliha Raja Abdul
Chan, Kok-Gan
Goh, Kian Mau
Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase
title Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase
title_full Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase
title_fullStr Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase
title_full_unstemmed Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase
title_short Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase
title_sort protein engineering of selected residues from conserved sequence regions of a novel anoxybacillus α-amylase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5376179/
https://www.ncbi.nlm.nih.gov/pubmed/25069018
http://dx.doi.org/10.1038/srep05850
work_keys_str_mv AT ranjanivelayudhan proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase
AT janecekstefan proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase
AT chaikianpiaw proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase
AT shahirshafinaz proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase
AT rahmanrajanoorzaliharajaabdul proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase
AT chankokgan proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase
AT gohkianmau proteinengineeringofselectedresiduesfromconservedsequenceregionsofanovelanoxybacillusaamylase