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Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome
Many types of cuticular proteins are found in a single insect species, and their number and features are very diversified among insects. The cuticle matrix consists of many different proteins that confer the physical properties of the exoskeleton. However, the number and properties of cuticle protei...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5377371/ https://www.ncbi.nlm.nih.gov/pubmed/28368027 http://dx.doi.org/10.1038/srep45462 |
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author | Zhao, Xiaoming Gou, Xin Qin, Zhongyu Li, Daqi Wang, Yan Ma, Enbo Li, Sheng Zhang, Jianzhen |
author_facet | Zhao, Xiaoming Gou, Xin Qin, Zhongyu Li, Daqi Wang, Yan Ma, Enbo Li, Sheng Zhang, Jianzhen |
author_sort | Zhao, Xiaoming |
collection | PubMed |
description | Many types of cuticular proteins are found in a single insect species, and their number and features are very diversified among insects. The cuticle matrix consists of many different proteins that confer the physical properties of the exoskeleton. However, the number and properties of cuticle proteins in Locusta migratoria remain unclear. In the present study, Illumina sequencing and de novo assembly were combined to characterize the transcriptome of L. migratoria. Eighty-one cuticular protein genes were identified and divided into five groups: the CPR family (51), Tweedle (2), CPF/CPFLs (9), CPAP family (9), and other genes (10). Based on the expression patterns in different tissues and stages, most of the genes as a test were distributed in the integument, pronotum and wings, and expressed in selected stages with different patterns. The results showed no obvious correlation between the expression patterns and the conservative motifs. Additionally, each cluster displayed a different expression pattern that may possess a different function in the cuticle. Furthermore, the complexity of the large variety of genes displayed differential expression during the molting cycle may be associated with cuticle formation and may provide insights into the gene networks related to cuticle formation. |
format | Online Article Text |
id | pubmed-5377371 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53773712017-04-10 Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome Zhao, Xiaoming Gou, Xin Qin, Zhongyu Li, Daqi Wang, Yan Ma, Enbo Li, Sheng Zhang, Jianzhen Sci Rep Article Many types of cuticular proteins are found in a single insect species, and their number and features are very diversified among insects. The cuticle matrix consists of many different proteins that confer the physical properties of the exoskeleton. However, the number and properties of cuticle proteins in Locusta migratoria remain unclear. In the present study, Illumina sequencing and de novo assembly were combined to characterize the transcriptome of L. migratoria. Eighty-one cuticular protein genes were identified and divided into five groups: the CPR family (51), Tweedle (2), CPF/CPFLs (9), CPAP family (9), and other genes (10). Based on the expression patterns in different tissues and stages, most of the genes as a test were distributed in the integument, pronotum and wings, and expressed in selected stages with different patterns. The results showed no obvious correlation between the expression patterns and the conservative motifs. Additionally, each cluster displayed a different expression pattern that may possess a different function in the cuticle. Furthermore, the complexity of the large variety of genes displayed differential expression during the molting cycle may be associated with cuticle formation and may provide insights into the gene networks related to cuticle formation. Nature Publishing Group 2017-04-03 /pmc/articles/PMC5377371/ /pubmed/28368027 http://dx.doi.org/10.1038/srep45462 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Zhao, Xiaoming Gou, Xin Qin, Zhongyu Li, Daqi Wang, Yan Ma, Enbo Li, Sheng Zhang, Jianzhen Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome |
title | Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome |
title_full | Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome |
title_fullStr | Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome |
title_full_unstemmed | Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome |
title_short | Identification and expression of cuticular protein genes based on Locusta migratoria transcriptome |
title_sort | identification and expression of cuticular protein genes based on locusta migratoria transcriptome |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5377371/ https://www.ncbi.nlm.nih.gov/pubmed/28368027 http://dx.doi.org/10.1038/srep45462 |
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