Cargando…

Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI

Structural and functional MRI unveil many hidden properties of the human brain. We performed this multi-class classification study on selected subjects from the publically available attention deficit hyperactivity disorder ADHD-200 dataset of patients and healthy children. The dataset has three grou...

Descripción completa

Detalles Bibliográficos
Autores principales: Qureshi, Muhammad Naveed Iqbal, Oh, Jooyoung, Min, Beomjun, Jo, Hang Joon, Lee, Boreom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5378777/
https://www.ncbi.nlm.nih.gov/pubmed/28420972
http://dx.doi.org/10.3389/fnhum.2017.00157
_version_ 1782519477291712512
author Qureshi, Muhammad Naveed Iqbal
Oh, Jooyoung
Min, Beomjun
Jo, Hang Joon
Lee, Boreom
author_facet Qureshi, Muhammad Naveed Iqbal
Oh, Jooyoung
Min, Beomjun
Jo, Hang Joon
Lee, Boreom
author_sort Qureshi, Muhammad Naveed Iqbal
collection PubMed
description Structural and functional MRI unveil many hidden properties of the human brain. We performed this multi-class classification study on selected subjects from the publically available attention deficit hyperactivity disorder ADHD-200 dataset of patients and healthy children. The dataset has three groups, namely, ADHD inattentive, ADHD combined, and typically developing. We calculated the global averaged functional connectivity maps across the whole cortex to extract anatomical atlas parcellation based features from the resting-state fMRI (rs-fMRI) data and cortical parcellation based features from the structural MRI (sMRI) data. In addition, the preprocessed image volumes from both of these modalities followed an ANOVA analysis separately using all the voxels. This study utilized the average measure from the most significant regions acquired from ANOVA as features for classification in addition to the multi-modal and multi-measure features of structural and functional MRI data. We extracted most discriminative features by hierarchical sparse feature elimination and selection algorithm. These features include cortical thickness, image intensity, volume, cortical thickness standard deviation, surface area, and ANOVA based features respectively. An extreme learning machine performed both the binary and multi-class classifications in comparison with support vector machines. This article reports prediction accuracy of both unimodal and multi-modal features from test data. We achieved 76.190% (p < 0.0001) classification accuracy in multi-class settings as well as 92.857% (p < 0.0001) classification accuracy in binary settings. In addition, we found ANOVA-based significant regions of the brain that also play a vital role in the classification of ADHD. Thus, from a clinical perspective, this multi-modal group analysis approach with multi-measure features may improve the accuracy of the ADHD differential diagnosis.
format Online
Article
Text
id pubmed-5378777
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-53787772017-04-18 Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI Qureshi, Muhammad Naveed Iqbal Oh, Jooyoung Min, Beomjun Jo, Hang Joon Lee, Boreom Front Hum Neurosci Neuroscience Structural and functional MRI unveil many hidden properties of the human brain. We performed this multi-class classification study on selected subjects from the publically available attention deficit hyperactivity disorder ADHD-200 dataset of patients and healthy children. The dataset has three groups, namely, ADHD inattentive, ADHD combined, and typically developing. We calculated the global averaged functional connectivity maps across the whole cortex to extract anatomical atlas parcellation based features from the resting-state fMRI (rs-fMRI) data and cortical parcellation based features from the structural MRI (sMRI) data. In addition, the preprocessed image volumes from both of these modalities followed an ANOVA analysis separately using all the voxels. This study utilized the average measure from the most significant regions acquired from ANOVA as features for classification in addition to the multi-modal and multi-measure features of structural and functional MRI data. We extracted most discriminative features by hierarchical sparse feature elimination and selection algorithm. These features include cortical thickness, image intensity, volume, cortical thickness standard deviation, surface area, and ANOVA based features respectively. An extreme learning machine performed both the binary and multi-class classifications in comparison with support vector machines. This article reports prediction accuracy of both unimodal and multi-modal features from test data. We achieved 76.190% (p < 0.0001) classification accuracy in multi-class settings as well as 92.857% (p < 0.0001) classification accuracy in binary settings. In addition, we found ANOVA-based significant regions of the brain that also play a vital role in the classification of ADHD. Thus, from a clinical perspective, this multi-modal group analysis approach with multi-measure features may improve the accuracy of the ADHD differential diagnosis. Frontiers Media S.A. 2017-04-04 /pmc/articles/PMC5378777/ /pubmed/28420972 http://dx.doi.org/10.3389/fnhum.2017.00157 Text en Copyright © 2017 Qureshi, Oh, Min, Jo and Lee. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Qureshi, Muhammad Naveed Iqbal
Oh, Jooyoung
Min, Beomjun
Jo, Hang Joon
Lee, Boreom
Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI
title Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI
title_full Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI
title_fullStr Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI
title_full_unstemmed Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI
title_short Multi-modal, Multi-measure, and Multi-class Discrimination of ADHD with Hierarchical Feature Extraction and Extreme Learning Machine Using Structural and Functional Brain MRI
title_sort multi-modal, multi-measure, and multi-class discrimination of adhd with hierarchical feature extraction and extreme learning machine using structural and functional brain mri
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5378777/
https://www.ncbi.nlm.nih.gov/pubmed/28420972
http://dx.doi.org/10.3389/fnhum.2017.00157
work_keys_str_mv AT qureshimuhammadnaveediqbal multimodalmultimeasureandmulticlassdiscriminationofadhdwithhierarchicalfeatureextractionandextremelearningmachineusingstructuralandfunctionalbrainmri
AT ohjooyoung multimodalmultimeasureandmulticlassdiscriminationofadhdwithhierarchicalfeatureextractionandextremelearningmachineusingstructuralandfunctionalbrainmri
AT minbeomjun multimodalmultimeasureandmulticlassdiscriminationofadhdwithhierarchicalfeatureextractionandextremelearningmachineusingstructuralandfunctionalbrainmri
AT johangjoon multimodalmultimeasureandmulticlassdiscriminationofadhdwithhierarchicalfeatureextractionandextremelearningmachineusingstructuralandfunctionalbrainmri
AT leeboreom multimodalmultimeasureandmulticlassdiscriminationofadhdwithhierarchicalfeatureextractionandextremelearningmachineusingstructuralandfunctionalbrainmri