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X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa

The role of seemingly non-enzymatic proteins in complexes interconverting UDP-arabinopyranose and UDP-arabinofuranose (UDP-arabinosemutases; UAMs) in the plant cytosol remains unknown. To shed light on their function, crystallographic and functional studies of the seemingly non-enzymatic UAM2 protei...

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Autores principales: Welner, Ditte Hededam, Tsai, Alex Yi-Lin, DeGiovanni, Andy M., Scheller, Henrik Vibe, Adams, Paul D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5379175/
https://www.ncbi.nlm.nih.gov/pubmed/28368284
http://dx.doi.org/10.1107/S2053230X17004587
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author Welner, Ditte Hededam
Tsai, Alex Yi-Lin
DeGiovanni, Andy M.
Scheller, Henrik Vibe
Adams, Paul D.
author_facet Welner, Ditte Hededam
Tsai, Alex Yi-Lin
DeGiovanni, Andy M.
Scheller, Henrik Vibe
Adams, Paul D.
author_sort Welner, Ditte Hededam
collection PubMed
description The role of seemingly non-enzymatic proteins in complexes interconverting UDP-arabinopyranose and UDP-arabinofuranose (UDP-arabinosemutases; UAMs) in the plant cytosol remains unknown. To shed light on their function, crystallographic and functional studies of the seemingly non-enzymatic UAM2 protein from Oryza sativa (OsUAM2) were undertaken. Here, X-ray diffraction data are reported, as well as analysis of the oligomeric state in the crystal and in solution. OsUAM2 crystallizes readily but forms highly radiation-sensitive crystals with limited diffraction power, requiring careful low-dose vector data acquisition. Using size-exclusion chromatography, it is shown that the protein is monomeric in solution. Finally, limited proteolysis was employed to demonstrate DTT-enhanced proteolytic digestion, indicating the existence of at least one intramolecular disulfide bridge or, alternatively, a requirement for a structural metal ion.
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spelling pubmed-53791752017-04-21 X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa Welner, Ditte Hededam Tsai, Alex Yi-Lin DeGiovanni, Andy M. Scheller, Henrik Vibe Adams, Paul D. Acta Crystallogr F Struct Biol Commun Research Communications The role of seemingly non-enzymatic proteins in complexes interconverting UDP-arabinopyranose and UDP-arabinofuranose (UDP-arabinosemutases; UAMs) in the plant cytosol remains unknown. To shed light on their function, crystallographic and functional studies of the seemingly non-enzymatic UAM2 protein from Oryza sativa (OsUAM2) were undertaken. Here, X-ray diffraction data are reported, as well as analysis of the oligomeric state in the crystal and in solution. OsUAM2 crystallizes readily but forms highly radiation-sensitive crystals with limited diffraction power, requiring careful low-dose vector data acquisition. Using size-exclusion chromatography, it is shown that the protein is monomeric in solution. Finally, limited proteolysis was employed to demonstrate DTT-enhanced proteolytic digestion, indicating the existence of at least one intramolecular disulfide bridge or, alternatively, a requirement for a structural metal ion. International Union of Crystallography 2017-03-29 /pmc/articles/PMC5379175/ /pubmed/28368284 http://dx.doi.org/10.1107/S2053230X17004587 Text en © Welner et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Research Communications
Welner, Ditte Hededam
Tsai, Alex Yi-Lin
DeGiovanni, Andy M.
Scheller, Henrik Vibe
Adams, Paul D.
X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa
title X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa
title_full X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa
title_fullStr X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa
title_full_unstemmed X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa
title_short X-ray diffraction analysis and in vitro characterization of the UAM2 protein from Oryza sativa
title_sort x-ray diffraction analysis and in vitro characterization of the uam2 protein from oryza sativa
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5379175/
https://www.ncbi.nlm.nih.gov/pubmed/28368284
http://dx.doi.org/10.1107/S2053230X17004587
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