Cargando…
NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer
Background: Nuclear receptors (NRs) are a class of transcription factors that regulate many cellular functions through manipulation of gene expression and also play important roles in tumorigenesis, proliferation, progression and prognosis in various kinds of cancers according to recent studies. Thi...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5381174/ https://www.ncbi.nlm.nih.gov/pubmed/28382148 http://dx.doi.org/10.7150/jca.17845 |
_version_ | 1782519886747009024 |
---|---|
author | Wu, Junlong Wan, Fangning Sheng, Haoyue Shi, Guohai Shen, Yijun Lin, Guowen Dai, Bo Zhu, Yiping Ye, Dingwei |
author_facet | Wu, Junlong Wan, Fangning Sheng, Haoyue Shi, Guohai Shen, Yijun Lin, Guowen Dai, Bo Zhu, Yiping Ye, Dingwei |
author_sort | Wu, Junlong |
collection | PubMed |
description | Background: Nuclear receptors (NRs) are a class of transcription factors that regulate many cellular functions through manipulation of gene expression and also play important roles in tumorigenesis, proliferation, progression and prognosis in various kinds of cancers according to recent studies. This work aimed to determine the predictive ability of NRs in muscle-invasive bladder cancer (MIBC). Patients and methods: A total of 308 MIBC patients with complete clinicopathological and RNASeq data from The Cancer Genome Atlas (TCGA) cohort were collected for filtration. Genes showed clear correlations with overall survival (OS) and recurrence free survival (RFS) were further validated in 123 MIBC patients recruited consecutively from 2008 to 2012 in Fudan University Shanghai Cancer Center (FUSCC) cohort. Cox proportional hazards regression model and Kaplan-Meier plot were used to assess the relative factors. Results: In TCGA cohort, we found that high NR1H3 (HR=0.779, 95% CI: 0.634 - 0.957), NR2C1 (HR=0.673, 95% CI: 0.458 - 0.989) and NR2F6 (HR=0.750, 95% CI: 0.574 - 0.980) expressions were independent factors of favorable OS, while only low NR1H3 (log-rank test, P=0.0076) and NR2F6 (log-rank test, P=0.0395) expressions had the ability to predict poor prognosis for RFS. Further, in FUSCC validating cohort, we confirmed that low NR1H3 expression level was independent factor of poor OS (HR=1.295, 95% CI: 1.064 - 1.576) and it had the ability to predict poor RFS (log-rank test, P=0.0059). Conclusions: Low NR1H3 expression level is an independent prognostic factor of poor OS, and can also predict worse RFS in MIBC patients. Our “TCGA filtrating and local database validating” model can help reveal more prognostic biomarkers and cast a new light in understanding certain gene function in MIBC. |
format | Online Article Text |
id | pubmed-5381174 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-53811742017-04-05 NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer Wu, Junlong Wan, Fangning Sheng, Haoyue Shi, Guohai Shen, Yijun Lin, Guowen Dai, Bo Zhu, Yiping Ye, Dingwei J Cancer Research Paper Background: Nuclear receptors (NRs) are a class of transcription factors that regulate many cellular functions through manipulation of gene expression and also play important roles in tumorigenesis, proliferation, progression and prognosis in various kinds of cancers according to recent studies. This work aimed to determine the predictive ability of NRs in muscle-invasive bladder cancer (MIBC). Patients and methods: A total of 308 MIBC patients with complete clinicopathological and RNASeq data from The Cancer Genome Atlas (TCGA) cohort were collected for filtration. Genes showed clear correlations with overall survival (OS) and recurrence free survival (RFS) were further validated in 123 MIBC patients recruited consecutively from 2008 to 2012 in Fudan University Shanghai Cancer Center (FUSCC) cohort. Cox proportional hazards regression model and Kaplan-Meier plot were used to assess the relative factors. Results: In TCGA cohort, we found that high NR1H3 (HR=0.779, 95% CI: 0.634 - 0.957), NR2C1 (HR=0.673, 95% CI: 0.458 - 0.989) and NR2F6 (HR=0.750, 95% CI: 0.574 - 0.980) expressions were independent factors of favorable OS, while only low NR1H3 (log-rank test, P=0.0076) and NR2F6 (log-rank test, P=0.0395) expressions had the ability to predict poor prognosis for RFS. Further, in FUSCC validating cohort, we confirmed that low NR1H3 expression level was independent factor of poor OS (HR=1.295, 95% CI: 1.064 - 1.576) and it had the ability to predict poor RFS (log-rank test, P=0.0059). Conclusions: Low NR1H3 expression level is an independent prognostic factor of poor OS, and can also predict worse RFS in MIBC patients. Our “TCGA filtrating and local database validating” model can help reveal more prognostic biomarkers and cast a new light in understanding certain gene function in MIBC. Ivyspring International Publisher 2017-03-07 /pmc/articles/PMC5381174/ /pubmed/28382148 http://dx.doi.org/10.7150/jca.17845 Text en © Ivyspring International Publisher This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Wu, Junlong Wan, Fangning Sheng, Haoyue Shi, Guohai Shen, Yijun Lin, Guowen Dai, Bo Zhu, Yiping Ye, Dingwei NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer |
title | NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer |
title_full | NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer |
title_fullStr | NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer |
title_full_unstemmed | NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer |
title_short | NR1H3 Expression is a Prognostic Factor of Overall Survival for Patients with Muscle-Invasive Bladder Cancer |
title_sort | nr1h3 expression is a prognostic factor of overall survival for patients with muscle-invasive bladder cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5381174/ https://www.ncbi.nlm.nih.gov/pubmed/28382148 http://dx.doi.org/10.7150/jca.17845 |
work_keys_str_mv | AT wujunlong nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT wanfangning nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT shenghaoyue nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT shiguohai nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT shenyijun nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT linguowen nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT daibo nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT zhuyiping nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer AT yedingwei nr1h3expressionisaprognosticfactorofoverallsurvivalforpatientswithmuscleinvasivebladdercancer |