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How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation

One of the most intriguing questions in evolution is how organisms exhibit suitable phenotypic variation to rapidly adapt in novel selective environments. Such variability is crucial for evolvability, but poorly understood. In particular, how can natural selection favour developmental organisations...

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Autores principales: Kouvaris, Kostas, Clune, Jeff, Kounios, Loizos, Brede, Markus, Watson, Richard A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5383015/
https://www.ncbi.nlm.nih.gov/pubmed/28384156
http://dx.doi.org/10.1371/journal.pcbi.1005358
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author Kouvaris, Kostas
Clune, Jeff
Kounios, Loizos
Brede, Markus
Watson, Richard A.
author_facet Kouvaris, Kostas
Clune, Jeff
Kounios, Loizos
Brede, Markus
Watson, Richard A.
author_sort Kouvaris, Kostas
collection PubMed
description One of the most intriguing questions in evolution is how organisms exhibit suitable phenotypic variation to rapidly adapt in novel selective environments. Such variability is crucial for evolvability, but poorly understood. In particular, how can natural selection favour developmental organisations that facilitate adaptive evolution in previously unseen environments? Such a capacity suggests foresight that is incompatible with the short-sighted concept of natural selection. A potential resolution is provided by the idea that evolution may discover and exploit information not only about the particular phenotypes selected in the past, but their underlying structural regularities: new phenotypes, with the same underlying regularities, but novel particulars, may then be useful in new environments. If true, we still need to understand the conditions in which natural selection will discover such deep regularities rather than exploiting ‘quick fixes’ (i.e., fixes that provide adaptive phenotypes in the short term, but limit future evolvability). Here we argue that the ability of evolution to discover such regularities is formally analogous to learning principles, familiar in humans and machines, that enable generalisation from past experience. Conversely, natural selection that fails to enhance evolvability is directly analogous to the learning problem of over-fitting and the subsequent failure to generalise. We support the conclusion that evolving systems and learning systems are different instantiations of the same algorithmic principles by showing that existing results from the learning domain can be transferred to the evolution domain. Specifically, we show that conditions that alleviate over-fitting in learning systems successfully predict which biological conditions (e.g., environmental variation, regularity, noise or a pressure for developmental simplicity) enhance evolvability. This equivalence provides access to a well-developed theoretical framework from learning theory that enables a characterisation of the general conditions for the evolution of evolvability.
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spelling pubmed-53830152017-05-03 How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation Kouvaris, Kostas Clune, Jeff Kounios, Loizos Brede, Markus Watson, Richard A. PLoS Comput Biol Research Article One of the most intriguing questions in evolution is how organisms exhibit suitable phenotypic variation to rapidly adapt in novel selective environments. Such variability is crucial for evolvability, but poorly understood. In particular, how can natural selection favour developmental organisations that facilitate adaptive evolution in previously unseen environments? Such a capacity suggests foresight that is incompatible with the short-sighted concept of natural selection. A potential resolution is provided by the idea that evolution may discover and exploit information not only about the particular phenotypes selected in the past, but their underlying structural regularities: new phenotypes, with the same underlying regularities, but novel particulars, may then be useful in new environments. If true, we still need to understand the conditions in which natural selection will discover such deep regularities rather than exploiting ‘quick fixes’ (i.e., fixes that provide adaptive phenotypes in the short term, but limit future evolvability). Here we argue that the ability of evolution to discover such regularities is formally analogous to learning principles, familiar in humans and machines, that enable generalisation from past experience. Conversely, natural selection that fails to enhance evolvability is directly analogous to the learning problem of over-fitting and the subsequent failure to generalise. We support the conclusion that evolving systems and learning systems are different instantiations of the same algorithmic principles by showing that existing results from the learning domain can be transferred to the evolution domain. Specifically, we show that conditions that alleviate over-fitting in learning systems successfully predict which biological conditions (e.g., environmental variation, regularity, noise or a pressure for developmental simplicity) enhance evolvability. This equivalence provides access to a well-developed theoretical framework from learning theory that enables a characterisation of the general conditions for the evolution of evolvability. Public Library of Science 2017-04-06 /pmc/articles/PMC5383015/ /pubmed/28384156 http://dx.doi.org/10.1371/journal.pcbi.1005358 Text en © 2017 Kouvaris et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kouvaris, Kostas
Clune, Jeff
Kounios, Loizos
Brede, Markus
Watson, Richard A.
How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
title How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
title_full How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
title_fullStr How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
title_full_unstemmed How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
title_short How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
title_sort how evolution learns to generalise: using the principles of learning theory to understand the evolution of developmental organisation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5383015/
https://www.ncbi.nlm.nih.gov/pubmed/28384156
http://dx.doi.org/10.1371/journal.pcbi.1005358
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