Cargando…

Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection

It has been shown that inter-individual variation in host response to porcine reproductive and respiratory syndrome (PRRS) has a heritable component, yet little is known about the underlying genetic architecture of gene expression in response to PRRS virus (PRRSV) infection. Here, we integrated geno...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kommadath, Arun, Bao, Hua, Choi, Igseo, Reecy, James M., Koltes, James E., Fritz-Waters, Elyn, Eisley, Chris J., Grant, Jason R., Rowland, Robert R. R., Tuggle, Christopher K., Dekkers, Jack C. M., Lunney, Joan K., Guan, Le Luo, Stothard, Paul, Plastow, Graham S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5385538/ https://www.ncbi.nlm.nih.gov/pubmed/28393889 http://dx.doi.org/10.1038/srep46203

Ejemplares similares

Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus (PRRSV) reveals pathway differences between pigs with alternate genotypes for a major host response QTL
por: Schroyen, Martine, et al.
Publicado: (2016)

Whole blood microarray analysis of pigs showing extreme phenotypes after a porcine reproductive and respiratory syndrome virus infection
por: Schroyen, Martine, et al.
Publicado: (2015)

Increasing gene discovery and coverage using RNA-seq of globin RNA reduced porcine blood samples
por: Choi, Igseo, et al.
Publicado: (2014)

Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection
por: Koltes, James E., et al.
Publicado: (2015)

Differences in Whole Blood Gene Expression Associated with Infection Time-Course and Extent of Fetal Mortality in a Reproductive Model of Type 2 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Infection
por: Wilkinson, Jamie M., et al.
Publicado: (2016)

Gene expression in tonsils in swine following infection with porcine reproductive and respiratory syndrome virus
por: Dong, Qian, et al.
Publicado: (2021)

Genome-wide association and genomic prediction for host response to porcine reproductive and respiratory syndrome virus infection
por: Boddicker, Nicholas J, et al.
Publicado: (2014)

Gene co-expression network analysis identifies porcine genes associated with variation in Salmonella shedding
por: Kommadath, Arun, et al.
Publicado: (2014)

Genomic prediction of piglet response to infection with one of two porcine reproductive and respiratory syndrome virus isolates
por: Waide, Emily H., et al.
Publicado: (2018)

Characterizing differential individual response to porcine reproductive and respiratory syndrome virus infection through statistical and functional analysis of gene expression
por: Arceo, Maria E., et al.
Publicado: (2013)

CNV Analysis of Host Responses to Porcine Reproductive and Respiratory Syndrome Virus Infection
por: Hay, El Hamidi A., et al.
Publicado: (2017)

MicroRNA Buffering and Altered Variance of Gene Expression in Response to Salmonella Infection
por: Bao, Hua, et al.
Publicado: (2014)

Control of porcine reproductive and respiratory syndrome (PRRS) through genetic improvements in disease resistance and tolerance
por: Rowland, Raymond R. R., et al.
Publicado: (2012)

Comparison of host genetic factors influencing pig response to infection with two North American isolates of porcine reproductive and respiratory syndrome virus
por: Hess, Andrew S., et al.
Publicado: (2016)

Associations of natural variation in the CD163 and other candidate genes on host response of nursery pigs to porcine reproductive and respiratory syndrome virus infection
por: Dong, Qian, et al.
Publicado: (2021)

Genome-wide analysis of the transcriptional response to porcine reproductive and respiratory syndrome virus infection at the maternal/fetal interface and in the fetus
por: Wilkinson, Jamie M., et al.
Publicado: (2016)

The effects of a globin blocker on the resolution of 3’mRNA sequencing data in porcine blood
por: Lim, Kyu-Sang, et al.
Publicado: (2019)

Porcine reproductive and respiratory syndrome virus: An update on an emerging and re-emerging viral disease of swine
por: Lunney, Joan K., et al.
Publicado: (2010)

Genome-wide whole blood microRNAome and transcriptome analyses reveal miRNA-mRNA regulated host response to foodborne pathogen Salmonella infection in swine
por: Bao, Hua, et al.
Publicado: (2015)

Birth Weight, Intrauterine Growth Retardation and Fetal Susceptibility to Porcine Reproductive and Respiratory Syndrome Virus
por: Ladinig, Andrea, et al.
Publicado: (2014)

Cytokine profiles in pregnant gilts experimentally infected with porcine reproductive and respiratory syndrome virus and relationships with viral load and fetal outcome
por: Ladinig, Andrea, et al.
Publicado: (2014)

Genomic regions associated with host response to porcine reproductive and respiratory syndrome vaccination and co-infection in nursery pigs
por: Dunkelberger, Jenelle R., et al.
Publicado: (2017)

Harnessing longitudinal information to identify genetic variation in tolerance of pigs to Porcine Reproductive and Respiratory Syndrome virus infection
por: Lough, Graham, et al.
Publicado: (2018)

BEAP: The BLAST Extension and Alignment Program- a tool for contig construction and analysis of preliminary genome sequence
por: Koltes, James E, et al.
Publicado: (2009)

Expansion of ruminant-specific microRNAs shapes target gene expression divergence between ruminant and non-ruminant species
por: Bao, Hua, et al.
Publicado: (2013)

Pig immune response to general stimulus and to porcine reproductive and respiratory syndrome virus infection: a meta-analysis approach
por: Badaoui, Bouabid, et al.
Publicado: (2013)

Probing genetic control of swine responses to PRRSV infection: current progress of the PRRS host genetics consortium
por: Lunney, Joan K, et al.
Publicado: (2011)

Use of multi-trait and random regression models to identify genetic variation in tolerance to porcine reproductive and respiratory syndrome virus
por: Lough, Graham, et al.
Publicado: (2017)

Maternal and fetal predictors of fetal viral load and death in third trimester, type 2 porcine reproductive and respiratory syndrome virus infected pregnant gilts
por: Ladinig, Andrea, et al.
Publicado: (2015)

Variation in Fetal Outcome, Viral Load and ORF5 Sequence Mutations in a Large Scale Study of Phenotypic Responses to Late Gestation Exposure to Type 2 Porcine Reproductive and Respiratory Syndrome Virus
por: Ladinig, Andrea, et al.
Publicado: (2014)

Quantitative Analysis of Porcine Reproductive and Respiratory Syndrome (PRRS) Viremia Profiles from Experimental Infection: A Statistical Modelling Approach
por: Islam, Zeenath U., et al.
Publicado: (2013)

Gene Co-expression Analysis Indicates Potential Pathways and Regulators of Beef Tenderness in Nellore Cattle
por: Gonçalves, Tássia Mangetti, et al.
Publicado: (2018)

Analysis of Porcine Transcriptional Response to Salmonella enterica serovar Choleraesuis suggests novel targets of NFkappaB are activated in the Mesenteric Lymph Node
por: Wang, Yanfang, et al.
Publicado: (2008)

Genome wide association study of thyroid hormone levels following challenge with porcine reproductive and respiratory syndrome virus
por: Van Goor, Angelica, et al.
Publicado: (2023)

A large interactive visual database of copy number variants discovered in taurine cattle
por: Kommadath, Arun, et al.
Publicado: (2019)

Development of a Novel Mule Deer Genomic Assembly and Species-Diagnostic SNP Panel for Assessing Introgression in Mule Deer, White-Tailed Deer, and Their Interspecific Hybrids
por: Russell, Ty, et al.
Publicado: (2019)

Transcriptional profiling of PRKG2-null growth plate identifies putative down-stream targets of PRKG2
por: Koltes, James E, et al.
Publicado: (2015)

Putative Regulatory Factors Associated with Intramuscular Fat Content
por: Cesar, Aline S. M., et al.
Publicado: (2015)

Gene Co-Expression Network Analysis Provides Novel Insights into Myostatin Regulation at Three Different Mouse Developmental Timepoints
por: Yang, Xuerong, et al.
Publicado: (2015)

Single nucleotide variant discovery of highly inbred Leghorn and Fayoumi chicken breeds using pooled whole genome resequencing data reveals insights into phenotype differences
por: Fleming, D. S., et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_0kadr271b2b77qemav5r2dpf6b