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An Algorithm of Association Rule Mining for Microbial Energy Prospection
The presence of hydrocarbons beneath earth’s surface produces some microbiological anomalies in soils and sediments. The detection of such microbial populations involves pure bio chemical processes which are specialized, expensive and time consuming. This paper proposes a new algorithm of context ba...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5385557/ https://www.ncbi.nlm.nih.gov/pubmed/28393846 http://dx.doi.org/10.1038/srep46108 |
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author | Shaheen, Muhammad Shahbaz, Muhammad |
author_facet | Shaheen, Muhammad Shahbaz, Muhammad |
author_sort | Shaheen, Muhammad |
collection | PubMed |
description | The presence of hydrocarbons beneath earth’s surface produces some microbiological anomalies in soils and sediments. The detection of such microbial populations involves pure bio chemical processes which are specialized, expensive and time consuming. This paper proposes a new algorithm of context based association rule mining on non spatial data. The algorithm is a modified form of already developed algorithm which was for spatial database only. The algorithm is applied to mine context based association rules on microbial database to extract interesting and useful associations of microbial attributes with existence of hydrocarbon reserve. The surface and soil manifestations caused by the presence of hydrocarbon oxidizing microbes are selected from existing literature and stored in a shared database. The algorithm is applied on the said database to generate direct and indirect associations among the stored microbial indicators. These associations are then correlated with the probability of hydrocarbon’s existence. The numerical evaluation shows better accuracy for non-spatial data as compared to conventional algorithms at generating reliable and robust rules. |
format | Online Article Text |
id | pubmed-5385557 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53855572017-04-12 An Algorithm of Association Rule Mining for Microbial Energy Prospection Shaheen, Muhammad Shahbaz, Muhammad Sci Rep Article The presence of hydrocarbons beneath earth’s surface produces some microbiological anomalies in soils and sediments. The detection of such microbial populations involves pure bio chemical processes which are specialized, expensive and time consuming. This paper proposes a new algorithm of context based association rule mining on non spatial data. The algorithm is a modified form of already developed algorithm which was for spatial database only. The algorithm is applied to mine context based association rules on microbial database to extract interesting and useful associations of microbial attributes with existence of hydrocarbon reserve. The surface and soil manifestations caused by the presence of hydrocarbon oxidizing microbes are selected from existing literature and stored in a shared database. The algorithm is applied on the said database to generate direct and indirect associations among the stored microbial indicators. These associations are then correlated with the probability of hydrocarbon’s existence. The numerical evaluation shows better accuracy for non-spatial data as compared to conventional algorithms at generating reliable and robust rules. Nature Publishing Group 2017-04-10 /pmc/articles/PMC5385557/ /pubmed/28393846 http://dx.doi.org/10.1038/srep46108 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Shaheen, Muhammad Shahbaz, Muhammad An Algorithm of Association Rule Mining for Microbial Energy Prospection |
title | An Algorithm of Association Rule Mining for Microbial Energy Prospection |
title_full | An Algorithm of Association Rule Mining for Microbial Energy Prospection |
title_fullStr | An Algorithm of Association Rule Mining for Microbial Energy Prospection |
title_full_unstemmed | An Algorithm of Association Rule Mining for Microbial Energy Prospection |
title_short | An Algorithm of Association Rule Mining for Microbial Energy Prospection |
title_sort | algorithm of association rule mining for microbial energy prospection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5385557/ https://www.ncbi.nlm.nih.gov/pubmed/28393846 http://dx.doi.org/10.1038/srep46108 |
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