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Repeatability of evolution on epistatic landscapes
Evolution is a dynamic process. The two classical forces of evolution are mutation and selection. Assuming small mutation rates, evolution can be predicted based solely on the fitness differences between phenotypes. Predicting an evolutionary process under varying mutation rates as well as varying f...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5386189/ https://www.ncbi.nlm.nih.gov/pubmed/25939695 http://dx.doi.org/10.1038/srep09607 |
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author | Bauer, Benedikt Gokhale, Chaitanya S. |
author_facet | Bauer, Benedikt Gokhale, Chaitanya S. |
author_sort | Bauer, Benedikt |
collection | PubMed |
description | Evolution is a dynamic process. The two classical forces of evolution are mutation and selection. Assuming small mutation rates, evolution can be predicted based solely on the fitness differences between phenotypes. Predicting an evolutionary process under varying mutation rates as well as varying fitness is still an open question. Experimental procedures, however, do include these complexities along with fluctuating population sizes and stochastic events such as extinctions. We investigate the mutational path probabilities of systems having epistatic effects on both fitness and mutation rates using a theoretical and computational framework. In contrast to previous models, we do not limit ourselves to the typical strong selection, weak mutation (SSWM)-regime or to fixed population sizes. Rather we allow epistatic interactions to also affect mutation rates. This can lead to qualitatively non-trivial dynamics. Pathways, that are negligible in the SSWM-regime, can overcome fitness valleys and become accessible. This finding has the potential to extend the traditional predictions based on the SSWM foundation and bring us closer to what is observed in experimental systems. |
format | Online Article Text |
id | pubmed-5386189 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53861892017-04-14 Repeatability of evolution on epistatic landscapes Bauer, Benedikt Gokhale, Chaitanya S. Sci Rep Article Evolution is a dynamic process. The two classical forces of evolution are mutation and selection. Assuming small mutation rates, evolution can be predicted based solely on the fitness differences between phenotypes. Predicting an evolutionary process under varying mutation rates as well as varying fitness is still an open question. Experimental procedures, however, do include these complexities along with fluctuating population sizes and stochastic events such as extinctions. We investigate the mutational path probabilities of systems having epistatic effects on both fitness and mutation rates using a theoretical and computational framework. In contrast to previous models, we do not limit ourselves to the typical strong selection, weak mutation (SSWM)-regime or to fixed population sizes. Rather we allow epistatic interactions to also affect mutation rates. This can lead to qualitatively non-trivial dynamics. Pathways, that are negligible in the SSWM-regime, can overcome fitness valleys and become accessible. This finding has the potential to extend the traditional predictions based on the SSWM foundation and bring us closer to what is observed in experimental systems. Nature Publishing Group 2015-05-05 /pmc/articles/PMC5386189/ /pubmed/25939695 http://dx.doi.org/10.1038/srep09607 Text en Copyright © 2015, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Bauer, Benedikt Gokhale, Chaitanya S. Repeatability of evolution on epistatic landscapes |
title | Repeatability of evolution on epistatic landscapes |
title_full | Repeatability of evolution on epistatic landscapes |
title_fullStr | Repeatability of evolution on epistatic landscapes |
title_full_unstemmed | Repeatability of evolution on epistatic landscapes |
title_short | Repeatability of evolution on epistatic landscapes |
title_sort | repeatability of evolution on epistatic landscapes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5386189/ https://www.ncbi.nlm.nih.gov/pubmed/25939695 http://dx.doi.org/10.1038/srep09607 |
work_keys_str_mv | AT bauerbenedikt repeatabilityofevolutiononepistaticlandscapes AT gokhalechaitanyas repeatabilityofevolutiononepistaticlandscapes |