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Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space

Attention-Deficit Hyperactive Disorder (ADHD) is one of the most common mental health disorders amongst school-aged children with an estimated prevalence of 5% in the global population (American Psychiatric Association, 2013). Stimulants, particularly methylphenidate (MPH), are the first-line option...

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Autores principales: Wong, Hin K., Tiffin, Paul A., Chappell, Michael J., Nichols, Thomas E., Welsh, Patrick R., Doyle, Orla M., Lopez-Kolkovska, Boryana C., Inglis, Sarah K., Coghill, David, Shen, Yuan, Tiño, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387107/
https://www.ncbi.nlm.nih.gov/pubmed/28443027
http://dx.doi.org/10.3389/fphys.2017.00199
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author Wong, Hin K.
Tiffin, Paul A.
Chappell, Michael J.
Nichols, Thomas E.
Welsh, Patrick R.
Doyle, Orla M.
Lopez-Kolkovska, Boryana C.
Inglis, Sarah K.
Coghill, David
Shen, Yuan
Tiño, Peter
author_facet Wong, Hin K.
Tiffin, Paul A.
Chappell, Michael J.
Nichols, Thomas E.
Welsh, Patrick R.
Doyle, Orla M.
Lopez-Kolkovska, Boryana C.
Inglis, Sarah K.
Coghill, David
Shen, Yuan
Tiño, Peter
author_sort Wong, Hin K.
collection PubMed
description Attention-Deficit Hyperactive Disorder (ADHD) is one of the most common mental health disorders amongst school-aged children with an estimated prevalence of 5% in the global population (American Psychiatric Association, 2013). Stimulants, particularly methylphenidate (MPH), are the first-line option in the treatment of ADHD (Reeves and Schweitzer, 2004; Dopheide and Pliszka, 2009) and are prescribed to an increasing number of children and adolescents in the US and the UK every year (Safer et al., 1996; McCarthy et al., 2009), though recent studies suggest that this is tailing off, e.g., Holden et al. (2013). Around 70% of children demonstrate a clinically significant treatment response to stimulant medication (Spencer et al., 1996; Schachter et al., 2001; Swanson et al., 2001; Barbaresi et al., 2006). However, it is unclear which patient characteristics may moderate treatment effectiveness. As such, most existing research has focused on investigating univariate or multivariate correlations between a set of patient characteristics and the treatment outcome, with respect to dosage of one or several types of medication. The results of such studies are often contradictory and inconclusive due to a combination of small sample sizes, low-quality data, or a lack of available information on covariates. In this paper, feature extraction techniques such as latent trait analysis were applied to reduce the dimension of on a large dataset of patient characteristics, including the responses to symptom-based questionnaires, developmental health factors, demographic variables such as age and gender, and socioeconomic factors such as parental income. We introduce a Bayesian modeling approach in a “learning in the model space” framework that combines existing knowledge in the literature on factors that may potentially affect treatment response, with constraints imposed by a treatment response model. The model is personalized such that the variability among subjects is accounted for by a set of subject-specific parameters. For remission classification, this approach compares favorably with conventional methods such as support vector machines and mixed effect models on a range of performance measures. For instance, the proposed approach achieved an area under receiver operator characteristic curve of 82–84%, compared to 75–77% obtained from conventional regression or machine learning (“learning in the data space”) methods.
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spelling pubmed-53871072017-04-25 Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space Wong, Hin K. Tiffin, Paul A. Chappell, Michael J. Nichols, Thomas E. Welsh, Patrick R. Doyle, Orla M. Lopez-Kolkovska, Boryana C. Inglis, Sarah K. Coghill, David Shen, Yuan Tiño, Peter Front Physiol Physiology Attention-Deficit Hyperactive Disorder (ADHD) is one of the most common mental health disorders amongst school-aged children with an estimated prevalence of 5% in the global population (American Psychiatric Association, 2013). Stimulants, particularly methylphenidate (MPH), are the first-line option in the treatment of ADHD (Reeves and Schweitzer, 2004; Dopheide and Pliszka, 2009) and are prescribed to an increasing number of children and adolescents in the US and the UK every year (Safer et al., 1996; McCarthy et al., 2009), though recent studies suggest that this is tailing off, e.g., Holden et al. (2013). Around 70% of children demonstrate a clinically significant treatment response to stimulant medication (Spencer et al., 1996; Schachter et al., 2001; Swanson et al., 2001; Barbaresi et al., 2006). However, it is unclear which patient characteristics may moderate treatment effectiveness. As such, most existing research has focused on investigating univariate or multivariate correlations between a set of patient characteristics and the treatment outcome, with respect to dosage of one or several types of medication. The results of such studies are often contradictory and inconclusive due to a combination of small sample sizes, low-quality data, or a lack of available information on covariates. In this paper, feature extraction techniques such as latent trait analysis were applied to reduce the dimension of on a large dataset of patient characteristics, including the responses to symptom-based questionnaires, developmental health factors, demographic variables such as age and gender, and socioeconomic factors such as parental income. We introduce a Bayesian modeling approach in a “learning in the model space” framework that combines existing knowledge in the literature on factors that may potentially affect treatment response, with constraints imposed by a treatment response model. The model is personalized such that the variability among subjects is accounted for by a set of subject-specific parameters. For remission classification, this approach compares favorably with conventional methods such as support vector machines and mixed effect models on a range of performance measures. For instance, the proposed approach achieved an area under receiver operator characteristic curve of 82–84%, compared to 75–77% obtained from conventional regression or machine learning (“learning in the data space”) methods. Frontiers Media S.A. 2017-04-11 /pmc/articles/PMC5387107/ /pubmed/28443027 http://dx.doi.org/10.3389/fphys.2017.00199 Text en Copyright © 2017 Wong, Tiffin, Chappell, Nichols, Welsh, Doyle, Lopez-Kolkovska, Inglis, Coghill, Shen and Tiño. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Physiology
Wong, Hin K.
Tiffin, Paul A.
Chappell, Michael J.
Nichols, Thomas E.
Welsh, Patrick R.
Doyle, Orla M.
Lopez-Kolkovska, Boryana C.
Inglis, Sarah K.
Coghill, David
Shen, Yuan
Tiño, Peter
Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space
title Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space
title_full Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space
title_fullStr Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space
title_full_unstemmed Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space
title_short Personalized Medication Response Prediction for Attention-Deficit Hyperactivity Disorder: Learning in the Model Space vs. Learning in the Data Space
title_sort personalized medication response prediction for attention-deficit hyperactivity disorder: learning in the model space vs. learning in the data space
topic Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387107/
https://www.ncbi.nlm.nih.gov/pubmed/28443027
http://dx.doi.org/10.3389/fphys.2017.00199
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