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Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress
High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis ter...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387894/ https://www.ncbi.nlm.nih.gov/pubmed/28417099 http://dx.doi.org/10.1016/j.dib.2017.03.021 |
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author | Yang, Bingxian Guan, Qijie Tian, Jingkui Komatsu, Setsuko |
author_facet | Yang, Bingxian Guan, Qijie Tian, Jingkui Komatsu, Setsuko |
author_sort | Yang, Bingxian |
collection | PubMed |
description | High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis terniflora DC. The experimental design for the transcriptomic and proteomic analyses in leaves of C. terniflora under stresses was organized into a picture. For transcriptomics, mRNA-sequencing technology was used. Genes identified in leaves of C. terniflora at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were listed; genes with different expression levels at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were also presented in this DiB article. For proteomics, a gel-free/label-free proteomic technique was used. Proteins with different abundances in leaves at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were presented in this DiB article. In order to monitor the expression levels of genes under the stress, quantitative reverse transcription polymerase chain reaction was performed. The primer sequences of genes selected for quantitative reverse transcription polymerase chain reaction was presented in this DiB article. |
format | Online Article Text |
id | pubmed-5387894 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-53878942017-04-17 Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress Yang, Bingxian Guan, Qijie Tian, Jingkui Komatsu, Setsuko Data Brief Data Article High level of UV-B irradiation followed by dark treatment accumulates secondary metabolites in Clematis terniflora DC. To investigate the response mechanism under high level of UV-B irradiation followed by dark treatment, transcriptomic and proteomic analyses were performed in leaves of Clematis terniflora DC. The experimental design for the transcriptomic and proteomic analyses in leaves of C. terniflora under stresses was organized into a picture. For transcriptomics, mRNA-sequencing technology was used. Genes identified in leaves of C. terniflora at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were listed; genes with different expression levels at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were also presented in this DiB article. For proteomics, a gel-free/label-free proteomic technique was used. Proteins with different abundances in leaves at starting point, high level of UV-B irradiation, and high level of UV-B irradiation followed by dark treatment were presented in this DiB article. In order to monitor the expression levels of genes under the stress, quantitative reverse transcription polymerase chain reaction was performed. The primer sequences of genes selected for quantitative reverse transcription polymerase chain reaction was presented in this DiB article. Elsevier 2017-03-25 /pmc/articles/PMC5387894/ /pubmed/28417099 http://dx.doi.org/10.1016/j.dib.2017.03.021 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Yang, Bingxian Guan, Qijie Tian, Jingkui Komatsu, Setsuko Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title | Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_full | Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_fullStr | Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_full_unstemmed | Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_short | Data for transcriptomic and proteomic analyses of leaves from Clematis terniflora DC. under binary stress |
title_sort | data for transcriptomic and proteomic analyses of leaves from clematis terniflora dc. under binary stress |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387894/ https://www.ncbi.nlm.nih.gov/pubmed/28417099 http://dx.doi.org/10.1016/j.dib.2017.03.021 |
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