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A high-throughput molecular data resource for cutaneous neurofibromas

Neurofibromatosis type 1 (NF1) is a genetic disorder with a range of clinical manifestations such as widespread growth of benign tumours called neurofibromas, pain, learning disorders, bone deformities, vascular abnormalities and even malignant tumours. With the establishment of the Children’s Tumou...

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Autores principales: Gosline, Sara J.C., Weinberg, Hubert, Knight, Pamela, Yu, Thomas, Guo, Xindi, Prasad, Nripesh, Jones, Angela, Shrestha, Shristi, Boone, Braden, Levy, Shawn E., La Rosa, Salvatore, Guinney, Justin, Bakker, Annette
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387919/
https://www.ncbi.nlm.nih.gov/pubmed/28398289
http://dx.doi.org/10.1038/sdata.2017.45
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author Gosline, Sara J.C.
Weinberg, Hubert
Knight, Pamela
Yu, Thomas
Guo, Xindi
Prasad, Nripesh
Jones, Angela
Shrestha, Shristi
Boone, Braden
Levy, Shawn E.
La Rosa, Salvatore
Guinney, Justin
Bakker, Annette
author_facet Gosline, Sara J.C.
Weinberg, Hubert
Knight, Pamela
Yu, Thomas
Guo, Xindi
Prasad, Nripesh
Jones, Angela
Shrestha, Shristi
Boone, Braden
Levy, Shawn E.
La Rosa, Salvatore
Guinney, Justin
Bakker, Annette
author_sort Gosline, Sara J.C.
collection PubMed
description Neurofibromatosis type 1 (NF1) is a genetic disorder with a range of clinical manifestations such as widespread growth of benign tumours called neurofibromas, pain, learning disorders, bone deformities, vascular abnormalities and even malignant tumours. With the establishment of the Children’s Tumour Foundation biobank, neurofibroma samples can now be collected directly from patients to be analysed by the larger scientific community. This work describes a pilot study to characterize one class of neurofibroma, cutaneous neurofibromas, by molecularly profiling of ~40 cutaneous neurofibromas collected from 11 individual patients. Data collected from each tumour includes (1) SNP Arrays, (2) Whole genome sequencing (WGS) and (3) RNA-Sequencing. These data are now freely available for further analysis at http://www.synapse.org/cutaneousNF.
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spelling pubmed-53879192017-04-21 A high-throughput molecular data resource for cutaneous neurofibromas Gosline, Sara J.C. Weinberg, Hubert Knight, Pamela Yu, Thomas Guo, Xindi Prasad, Nripesh Jones, Angela Shrestha, Shristi Boone, Braden Levy, Shawn E. La Rosa, Salvatore Guinney, Justin Bakker, Annette Sci Data Data Descriptor Neurofibromatosis type 1 (NF1) is a genetic disorder with a range of clinical manifestations such as widespread growth of benign tumours called neurofibromas, pain, learning disorders, bone deformities, vascular abnormalities and even malignant tumours. With the establishment of the Children’s Tumour Foundation biobank, neurofibroma samples can now be collected directly from patients to be analysed by the larger scientific community. This work describes a pilot study to characterize one class of neurofibroma, cutaneous neurofibromas, by molecularly profiling of ~40 cutaneous neurofibromas collected from 11 individual patients. Data collected from each tumour includes (1) SNP Arrays, (2) Whole genome sequencing (WGS) and (3) RNA-Sequencing. These data are now freely available for further analysis at http://www.synapse.org/cutaneousNF. Nature Publishing Group 2017-04-11 /pmc/articles/PMC5387919/ /pubmed/28398289 http://dx.doi.org/10.1038/sdata.2017.45 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0 Metadata associated with this Data Descriptor is available at http://www.nature.com/sdata/ and is released under the CC0 waiver to maximize reuse.
spellingShingle Data Descriptor
Gosline, Sara J.C.
Weinberg, Hubert
Knight, Pamela
Yu, Thomas
Guo, Xindi
Prasad, Nripesh
Jones, Angela
Shrestha, Shristi
Boone, Braden
Levy, Shawn E.
La Rosa, Salvatore
Guinney, Justin
Bakker, Annette
A high-throughput molecular data resource for cutaneous neurofibromas
title A high-throughput molecular data resource for cutaneous neurofibromas
title_full A high-throughput molecular data resource for cutaneous neurofibromas
title_fullStr A high-throughput molecular data resource for cutaneous neurofibromas
title_full_unstemmed A high-throughput molecular data resource for cutaneous neurofibromas
title_short A high-throughput molecular data resource for cutaneous neurofibromas
title_sort high-throughput molecular data resource for cutaneous neurofibromas
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387919/
https://www.ncbi.nlm.nih.gov/pubmed/28398289
http://dx.doi.org/10.1038/sdata.2017.45
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