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Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia
OBJECTIVE: The lack of epidemiological data and molecular diagnostic services in Malaysia has hampered the setting-up of a comprehensive management plan for patients with myotonic dystrophy type 1 (DM1), leading to delayed diagnosis, treatment and support for patients and families. The aim of this s...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BMJ Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387946/ https://www.ncbi.nlm.nih.gov/pubmed/28363916 http://dx.doi.org/10.1136/bmjopen-2015-010711 |
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author | Ambrose, Kathlin K Ishak, Taufik Lian, Lay-Hoong Goh, Khean-Jin Wong, Kum-Thong Ahmad-Annuar, Azlina Thong, Meow-Keong |
author_facet | Ambrose, Kathlin K Ishak, Taufik Lian, Lay-Hoong Goh, Khean-Jin Wong, Kum-Thong Ahmad-Annuar, Azlina Thong, Meow-Keong |
author_sort | Ambrose, Kathlin K |
collection | PubMed |
description | OBJECTIVE: The lack of epidemiological data and molecular diagnostic services in Malaysia has hampered the setting-up of a comprehensive management plan for patients with myotonic dystrophy type 1 (DM1), leading to delayed diagnosis, treatment and support for patients and families. The aim of this study was to estimate the prevalence of DM1 in the 3 major ethnic groups in Malaysia and evaluate the feasibility of a single tube triplet-primed PCR (TP-PCR) method for diagnosis of DM1 in Malaysia. DESIGN, SETTING AND PARTICIPANTS: We used PCR to determine the size of CTG repeats in 377 individuals not known to be affected by DM and 11 DM1 suspected patients, recruited from a tertiary hospital in Kuala Lumpur. TP-PCR was performed on selected samples, followed by Southern blot hybridisation of PCR amplified fragments to confirm and estimate the size of CTG expansion. OUTCOME MEASURES: The number of individuals not known to be affected by DM with (CTG)(>18) was determined according to ethnic group and as a whole population. The χ(2) test was performed to compare the distribution of (CTG)(>18) with 12 other populations. Additionally, the accuracy of TP-PCR in detecting CTG expansion in 11 patients with DM1 was determined by comparing the results with that from Southern blot hybridisation. RESULTS: Of the 754 chromosomes studied, (CTG)(>18) frequency of 3.60%, 1.57% and 4.00% in the Malay, Chinese and Indian subpopulations, respectively, was detected, showing similarities to data from Thai, Taiwanese and Kuwaiti populations. We also successfully detected CTG expansions in 9 patients using the TP-PCR method followed by the estimation of CTG expansion size via Southern blot hybridisation. CONCLUSIONS: The results show a low DM1 prevalence in Malaysia with the possibility of underdiagnosis and demonstrates the feasibility of using a clinical and TP-PCR-based approach for rapid and cost-effective DM1 diagnosis in developing countries. |
format | Online Article Text |
id | pubmed-5387946 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BMJ Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53879462017-05-03 Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia Ambrose, Kathlin K Ishak, Taufik Lian, Lay-Hoong Goh, Khean-Jin Wong, Kum-Thong Ahmad-Annuar, Azlina Thong, Meow-Keong BMJ Open Neurology OBJECTIVE: The lack of epidemiological data and molecular diagnostic services in Malaysia has hampered the setting-up of a comprehensive management plan for patients with myotonic dystrophy type 1 (DM1), leading to delayed diagnosis, treatment and support for patients and families. The aim of this study was to estimate the prevalence of DM1 in the 3 major ethnic groups in Malaysia and evaluate the feasibility of a single tube triplet-primed PCR (TP-PCR) method for diagnosis of DM1 in Malaysia. DESIGN, SETTING AND PARTICIPANTS: We used PCR to determine the size of CTG repeats in 377 individuals not known to be affected by DM and 11 DM1 suspected patients, recruited from a tertiary hospital in Kuala Lumpur. TP-PCR was performed on selected samples, followed by Southern blot hybridisation of PCR amplified fragments to confirm and estimate the size of CTG expansion. OUTCOME MEASURES: The number of individuals not known to be affected by DM with (CTG)(>18) was determined according to ethnic group and as a whole population. The χ(2) test was performed to compare the distribution of (CTG)(>18) with 12 other populations. Additionally, the accuracy of TP-PCR in detecting CTG expansion in 11 patients with DM1 was determined by comparing the results with that from Southern blot hybridisation. RESULTS: Of the 754 chromosomes studied, (CTG)(>18) frequency of 3.60%, 1.57% and 4.00% in the Malay, Chinese and Indian subpopulations, respectively, was detected, showing similarities to data from Thai, Taiwanese and Kuwaiti populations. We also successfully detected CTG expansions in 9 patients using the TP-PCR method followed by the estimation of CTG expansion size via Southern blot hybridisation. CONCLUSIONS: The results show a low DM1 prevalence in Malaysia with the possibility of underdiagnosis and demonstrates the feasibility of using a clinical and TP-PCR-based approach for rapid and cost-effective DM1 diagnosis in developing countries. BMJ Publishing Group 2017-03-31 /pmc/articles/PMC5387946/ /pubmed/28363916 http://dx.doi.org/10.1136/bmjopen-2015-010711 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/ This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ |
spellingShingle | Neurology Ambrose, Kathlin K Ishak, Taufik Lian, Lay-Hoong Goh, Khean-Jin Wong, Kum-Thong Ahmad-Annuar, Azlina Thong, Meow-Keong Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia |
title | Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia |
title_full | Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia |
title_fullStr | Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia |
title_full_unstemmed | Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia |
title_short | Analysis of CTG repeat length variation in the DMPK gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in Malaysia |
title_sort | analysis of ctg repeat length variation in the dmpk gene in the general population and the molecular diagnosis of myotonic dystrophy type 1 in malaysia |
topic | Neurology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5387946/ https://www.ncbi.nlm.nih.gov/pubmed/28363916 http://dx.doi.org/10.1136/bmjopen-2015-010711 |
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