Cargando…

A prior-based integrative framework for functional transcriptional regulatory network inference

Mostrar otras versiones (1)

Detalles Bibliográficos
Autores principales:	Siahpirani, Alireza F., Roy, Sushmita
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2017
Materias:	Erratum
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389683/ https://www.ncbi.nlm.nih.gov/pubmed/27899626 http://dx.doi.org/10.1093/nar/gkw1160

Ejemplares similares

A prior-based integrative framework for functional transcriptional regulatory network inference
por: Siahpirani, Alireza F., et al.
Publicado: (2017)

Dynamic regulatory module networks for inference of cell type–specific transcriptional networks
por: Siahpirani, Alireza Fotuhi, et al.
Publicado: (2022)

A Pan-Cancer Modular Regulatory Network Analysis to Identify Common and Cancer-Specific Network Components
por: Knaack, Sara A, et al.
Publicado: (2014)

Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasets
por: Zhang, Shilu, et al.
Publicado: (2023)

Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks
por: Marbach, Daniel, et al.
Publicado: (2012)

ERRATUM: Gene regulatory network inference and analysis of multidrug-resistant Pseudomonas aeruginosa
Publicado: (2020)

Identifying strengths and weaknesses of methods for computational network inference from single-cell RNA-seq data
por: McCalla, Sunnie Grace, et al.
Publicado: (2023)

Functional association networks as priors for gene regulatory network inference
por: Studham, Matthew E., et al.
Publicado: (2014)

Erratum to: Inferring interaction type in gene regulatory networks using co-expression data
por: Khosravi, Pegah, et al.
Publicado: (2015)

Integrated Module and Gene-Specific Regulatory Inference Implicates Upstream Signaling Networks
por: Roy, Sushmita, et al.
Publicado: (2013)

Inferring condition-specific transcription factor function from DNA binding and gene expression data
por: McCord, Rachel Patton, et al.
Publicado: (2010)

A multi-task graph-clustering approach for chromosome conformation capture data sets identifies conserved modules of chromosomal interactions
por: Fotuhi Siahpirani, Alireza, et al.
Publicado: (2016)

A predictive modeling approach for cell line-specific long-range regulatory interactions
por: Roy, Sushmita, et al.
Publicado: (2016)

A predictive modeling approach for cell line-specific long-range regulatory interactions
por: Roy, Sushmita, et al.
Publicado: (2015)

Inference of Bacterial Small RNA Regulatory Networks and Integration with Transcription Factor-Driven Regulatory Networks
por: Arrieta-Ortiz, Mario L., et al.
Publicado: (2020)

A Bayesian Framework That Integrates Heterogeneous Data for Inferring Gene Regulatory Networks
por: Santra, Tapesh
Publicado: (2014)

A system for generating transcription regulatory networks with combinatorial control of transcription
por: Roy, Sushmita, et al.
Publicado: (2008)

Erratum to: Construction and verification of the transcriptional regulatory response network of Streptococcus mutans upon treatment with the biofilm inhibitor carolacton
por: Sudhakar, Padhmanand, et al.
Publicado: (2014)

An Integrative Approach to Infer Regulation Programs in a Transcription Regulatory Module Network
por: Qi, Jianlong, et al.
Publicado: (2012)

RMaNI: Regulatory Module Network Inference framework
por: Madhamshettiwar, Piyush B, et al.
Publicado: (2013)

Inferring the role of transcription factors in regulatory networks
por: Veber, Philippe, et al.
Publicado: (2008)

An Overview of NCA-Based Algorithms for Transcriptional Regulatory Network Inference
por: Wang, Xu, et al.
Publicado: (2015)

Gene regulatory network inference by point-based Gaussian approximation filters incorporating the prior information
por: Jia, Bin, et al.
Publicado: (2013)

Robust data-driven incorporation of prior knowledge into the inference of dynamic regulatory networks
por: Greenfield, Alex, et al.
Publicado: (2013)

Erratum to: Causal Inference Network of Genes Related with Bone Metastasis of Breast Cancer and Osteoblasts Using Causal Bayesian Networks
por: Park, Sung Bae, et al.
Publicado: (2019)

On the Choice and Number of Microarrays for Transcriptional Regulatory Network Inference
por: Cosgrove, Elissa J, et al.
Publicado: (2010)

Information-Theoretic Inference of Large Transcriptional Regulatory Networks
por: Meyer, Patrick E, et al.
Publicado: (2007)

Inferring transcription factor collaborations in gene regulatory networks
por: Awad, Sherine, et al.
Publicado: (2014)

A computational framework for gene regulatory network inference that combines multiple methods and datasets
por: Gupta, Rita, et al.
Publicado: (2011)

Erratum: Dan Li et al.; Transcription Factor and lncRNA Regulatory Networks Identify Key Elements in Lung Adenocarcinoma. Genes 2018, 9, 12
por: Li, Dan, et al.
Publicado: (2018)

Erratum to: Functional variants of human papillomavirus type 16 demonstrate host genome integration and transcriptional alterations corresponding to their unique cancer epidemiology
por: Jackson, Robert, et al.
Publicado: (2016)

Erratum to: Efficient experimental design for uncertainty reduction in gene regulatory networks
por: Dehghannasiri, Roozbeh, et al.
Publicado: (2015)

Erratum to: The Drosophila transcriptional network is structured by microbiota
por: Dobson, Adam J., et al.
Publicado: (2017)

An Integrative Approach to Inferring Gene Regulatory Module Networks
por: Baitaluk, Michael, et al.
Publicado: (2012)

Integrative random forest for gene regulatory network inference
por: Petralia, Francesca, et al.
Publicado: (2015)

Erratum to: Evaluation of BLAST-based edge-weighting metrics used for homology inference with the Markov Clustering algorithm
por: Gibbons, Theodore R., et al.
Publicado: (2015)

WASABI: a dynamic iterative framework for gene regulatory network inference
por: Bonnaffoux, Arnaud, et al.
Publicado: (2019)

On the Impact of Entropy Estimation on Transcriptional Regulatory Network Inference Based on Mutual Information
por: Olsen, Catharina, et al.
Publicado: (2008)

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
por: Khan, Aziz, et al.
Publicado: (2018)

Erratum: Assessment of Upper Extremity Function in People With Stroke Based on the Framework of the ICF: A Narrative Review
por: Kim, Hanna, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_7u59krh74fthaellqroupdra06