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Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data

BACKGROUND: Feature selection methods are commonly used to identify subsets of relevant features to facilitate the construction of models for classification, yet little is known about how feature selection methods perform in diffusion tensor images (DTIs). In this study, feature selection and machin...

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Autores principales: Garcia-Chimeno, Yolanda, Garcia-Zapirain, Begonya, Gomez-Beldarrain, Marian, Fernandez-Ruanova, Begonya, Garcia-Monco, Juan Carlos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5390380/
https://www.ncbi.nlm.nih.gov/pubmed/28407777
http://dx.doi.org/10.1186/s12911-017-0434-4
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author Garcia-Chimeno, Yolanda
Garcia-Zapirain, Begonya
Gomez-Beldarrain, Marian
Fernandez-Ruanova, Begonya
Garcia-Monco, Juan Carlos
author_facet Garcia-Chimeno, Yolanda
Garcia-Zapirain, Begonya
Gomez-Beldarrain, Marian
Fernandez-Ruanova, Begonya
Garcia-Monco, Juan Carlos
author_sort Garcia-Chimeno, Yolanda
collection PubMed
description BACKGROUND: Feature selection methods are commonly used to identify subsets of relevant features to facilitate the construction of models for classification, yet little is known about how feature selection methods perform in diffusion tensor images (DTIs). In this study, feature selection and machine learning classification methods were tested for the purpose of automating diagnosis of migraines using both DTIs and questionnaire answers related to emotion and cognition – factors that influence of pain perceptions. METHODS: We select 52 adult subjects for the study divided into three groups: control group (15), subjects with sporadic migraine (19) and subjects with chronic migraine and medication overuse (18). These subjects underwent magnetic resonance with diffusion tensor to see white matter pathway integrity of the regions of interest involved in pain and emotion. The tests also gather data about pathology. The DTI images and test results were then introduced into feature selection algorithms (Gradient Tree Boosting, L1-based, Random Forest and Univariate) to reduce features of the first dataset and classification algorithms (SVM (Support Vector Machine), Boosting (Adaboost) and Naive Bayes) to perform a classification of migraine group. Moreover we implement a committee method to improve the classification accuracy based on feature selection algorithms. RESULTS: When classifying the migraine group, the greatest improvements in accuracy were made using the proposed committee-based feature selection method. Using this approach, the accuracy of classification into three types improved from 67 to 93% when using the Naive Bayes classifier, from 90 to 95% with the support vector machine classifier, 93 to 94% in boosting. The features that were determined to be most useful for classification included are related with the pain, analgesics and left uncinate brain (connected with the pain and emotions). CONCLUSIONS: The proposed feature selection committee method improved the performance of migraine diagnosis classifiers compared to individual feature selection methods, producing a robust system that achieved over 90% accuracy in all classifiers. The results suggest that the proposed methods can be used to support specialists in the classification of migraines in patients undergoing magnetic resonance imaging.
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spelling pubmed-53903802017-04-14 Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data Garcia-Chimeno, Yolanda Garcia-Zapirain, Begonya Gomez-Beldarrain, Marian Fernandez-Ruanova, Begonya Garcia-Monco, Juan Carlos BMC Med Inform Decis Mak Research Article BACKGROUND: Feature selection methods are commonly used to identify subsets of relevant features to facilitate the construction of models for classification, yet little is known about how feature selection methods perform in diffusion tensor images (DTIs). In this study, feature selection and machine learning classification methods were tested for the purpose of automating diagnosis of migraines using both DTIs and questionnaire answers related to emotion and cognition – factors that influence of pain perceptions. METHODS: We select 52 adult subjects for the study divided into three groups: control group (15), subjects with sporadic migraine (19) and subjects with chronic migraine and medication overuse (18). These subjects underwent magnetic resonance with diffusion tensor to see white matter pathway integrity of the regions of interest involved in pain and emotion. The tests also gather data about pathology. The DTI images and test results were then introduced into feature selection algorithms (Gradient Tree Boosting, L1-based, Random Forest and Univariate) to reduce features of the first dataset and classification algorithms (SVM (Support Vector Machine), Boosting (Adaboost) and Naive Bayes) to perform a classification of migraine group. Moreover we implement a committee method to improve the classification accuracy based on feature selection algorithms. RESULTS: When classifying the migraine group, the greatest improvements in accuracy were made using the proposed committee-based feature selection method. Using this approach, the accuracy of classification into three types improved from 67 to 93% when using the Naive Bayes classifier, from 90 to 95% with the support vector machine classifier, 93 to 94% in boosting. The features that were determined to be most useful for classification included are related with the pain, analgesics and left uncinate brain (connected with the pain and emotions). CONCLUSIONS: The proposed feature selection committee method improved the performance of migraine diagnosis classifiers compared to individual feature selection methods, producing a robust system that achieved over 90% accuracy in all classifiers. The results suggest that the proposed methods can be used to support specialists in the classification of migraines in patients undergoing magnetic resonance imaging. BioMed Central 2017-04-13 /pmc/articles/PMC5390380/ /pubmed/28407777 http://dx.doi.org/10.1186/s12911-017-0434-4 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Garcia-Chimeno, Yolanda
Garcia-Zapirain, Begonya
Gomez-Beldarrain, Marian
Fernandez-Ruanova, Begonya
Garcia-Monco, Juan Carlos
Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
title Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
title_full Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
title_fullStr Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
title_full_unstemmed Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
title_short Automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
title_sort automatic migraine classification via feature selection committee and machine learning techniques over imaging and questionnaire data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5390380/
https://www.ncbi.nlm.nih.gov/pubmed/28407777
http://dx.doi.org/10.1186/s12911-017-0434-4
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