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SMART-on-FHIR implemented over i2b2

We have developed an interface to serve patient data from Informatics for Integrating Biology and the Bedside (i2b2) repositories in the Fast Healthcare Interoperability Resources (FHIR) format, referred to as a SMART-on-FHIR cell. The cell serves FHIR resources on a per-patient basis, and supports...

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Autores principales: Wagholikar, Kavishwar B, Mandel, Joshua C, Klann, Jeffery G, Wattanasin, Nich, Mendis, Michael, Chute, Christopher G, Mandl, Kenneth D, Murphy, Shawn N
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5391721/
https://www.ncbi.nlm.nih.gov/pubmed/27274012
http://dx.doi.org/10.1093/jamia/ocw079
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author Wagholikar, Kavishwar B
Mandel, Joshua C
Klann, Jeffery G
Wattanasin, Nich
Mendis, Michael
Chute, Christopher G
Mandl, Kenneth D
Murphy, Shawn N
author_facet Wagholikar, Kavishwar B
Mandel, Joshua C
Klann, Jeffery G
Wattanasin, Nich
Mendis, Michael
Chute, Christopher G
Mandl, Kenneth D
Murphy, Shawn N
author_sort Wagholikar, Kavishwar B
collection PubMed
description We have developed an interface to serve patient data from Informatics for Integrating Biology and the Bedside (i2b2) repositories in the Fast Healthcare Interoperability Resources (FHIR) format, referred to as a SMART-on-FHIR cell. The cell serves FHIR resources on a per-patient basis, and supports the “substitutable” modular third-party applications (SMART) OAuth2 specification for authorization of client applications. It is implemented as an i2b2 server plug-in, consisting of 6 modules: authentication, REST, i2b2-to-FHIR converter, resource enrichment, query engine, and cache. The source code is freely available as open source. We tested the cell by accessing resources from a test i2b2 installation, demonstrating that a SMART app can be launched from the cell that accesses patient data stored in i2b2. We successfully retrieved demographics, medications, labs, and diagnoses for test patients. The SMART-on-FHIR cell will enable i2b2 sites to provide simplified but secure data access in FHIR format, and will spur innovation and interoperability. Further, it transforms i2b2 into an apps platform.
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spelling pubmed-53917212017-04-21 SMART-on-FHIR implemented over i2b2 Wagholikar, Kavishwar B Mandel, Joshua C Klann, Jeffery G Wattanasin, Nich Mendis, Michael Chute, Christopher G Mandl, Kenneth D Murphy, Shawn N J Am Med Inform Assoc Brief Communication We have developed an interface to serve patient data from Informatics for Integrating Biology and the Bedside (i2b2) repositories in the Fast Healthcare Interoperability Resources (FHIR) format, referred to as a SMART-on-FHIR cell. The cell serves FHIR resources on a per-patient basis, and supports the “substitutable” modular third-party applications (SMART) OAuth2 specification for authorization of client applications. It is implemented as an i2b2 server plug-in, consisting of 6 modules: authentication, REST, i2b2-to-FHIR converter, resource enrichment, query engine, and cache. The source code is freely available as open source. We tested the cell by accessing resources from a test i2b2 installation, demonstrating that a SMART app can be launched from the cell that accesses patient data stored in i2b2. We successfully retrieved demographics, medications, labs, and diagnoses for test patients. The SMART-on-FHIR cell will enable i2b2 sites to provide simplified but secure data access in FHIR format, and will spur innovation and interoperability. Further, it transforms i2b2 into an apps platform. Oxford University Press 2017-03 2016-06-06 /pmc/articles/PMC5391721/ /pubmed/27274012 http://dx.doi.org/10.1093/jamia/ocw079 Text en © The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Brief Communication
Wagholikar, Kavishwar B
Mandel, Joshua C
Klann, Jeffery G
Wattanasin, Nich
Mendis, Michael
Chute, Christopher G
Mandl, Kenneth D
Murphy, Shawn N
SMART-on-FHIR implemented over i2b2
title SMART-on-FHIR implemented over i2b2
title_full SMART-on-FHIR implemented over i2b2
title_fullStr SMART-on-FHIR implemented over i2b2
title_full_unstemmed SMART-on-FHIR implemented over i2b2
title_short SMART-on-FHIR implemented over i2b2
title_sort smart-on-fhir implemented over i2b2
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5391721/
https://www.ncbi.nlm.nih.gov/pubmed/27274012
http://dx.doi.org/10.1093/jamia/ocw079
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