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The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets
This comprehensive investigation was performed to evaluate the expression level and potential clinical value of NEAT1 in digestive system malignancies. A total of 57 lncRNA datasets of microarray or RNA-seq and 5 publications were included. The pooled standard mean deviation (SMD) indicated that NEA...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5392277/ https://www.ncbi.nlm.nih.gov/pubmed/28118609 http://dx.doi.org/10.18632/oncotarget.14756 |
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author | Xiong, Dan-Dan Feng, Zhen-Bo Cen, Wei-Luan Zeng, Jing-Jing Liang, Lu Tang, Rui-Xue Gan, Xiao-Ning Liang, Hai-Wei Li, Zu-Yun Chen, Gang Luo, Dian-Zhong |
author_facet | Xiong, Dan-Dan Feng, Zhen-Bo Cen, Wei-Luan Zeng, Jing-Jing Liang, Lu Tang, Rui-Xue Gan, Xiao-Ning Liang, Hai-Wei Li, Zu-Yun Chen, Gang Luo, Dian-Zhong |
author_sort | Xiong, Dan-Dan |
collection | PubMed |
description | This comprehensive investigation was performed to evaluate the expression level and potential clinical value of NEAT1 in digestive system malignancies. A total of 57 lncRNA datasets of microarray or RNA-seq and 5 publications were included. The pooled standard mean deviation (SMD) indicated that NEAT1 was down-regulated in esophageal carcinoma (ESCA, SMD = −0.35, 95% CI: −0.5~-0.20, P < 0.0001) and hepatocellular carcinoma (HCC, SMD = −0.47, 95% CI: −0.60~-0.34, P < 0.0001), while in pancreatic cancer (PC), NEAT1 was up-regulated (SMD = 0.45, 95% CI: 0.2~0.71, P = 0.001). However, NEAT1 expression in gastric cancer (GC), colorectal cancer (CRC), biliary tract cancer (BTC) and gallbladder carcinoma (GBC) showed no significant difference between cancer and control groups. The pooled area under the curve values for ESCA, GC, CRC, PC and HCC were 0.60, 0.89, 0.81, 0.77 and 0.69, respectively. Furthermore, our result demonstrated that a high expression of NEAT1 predicted an unfavorable prognosis in patients with digestive system malignancies (HR: 1.50, 95% CI: 1.28-1.76, P < 0.0001). Our study suggests that NEAT1 may play different roles in the initiation and progression of digestive system cancers and could be a potential diagnostic and prognostic biomarker in patients with digestive system carcinomas. Further and stricter studies with a larger number of cases are necessary to strengthen our conclusions. |
format | Online Article Text |
id | pubmed-5392277 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-53922772017-04-21 The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets Xiong, Dan-Dan Feng, Zhen-Bo Cen, Wei-Luan Zeng, Jing-Jing Liang, Lu Tang, Rui-Xue Gan, Xiao-Ning Liang, Hai-Wei Li, Zu-Yun Chen, Gang Luo, Dian-Zhong Oncotarget Research Paper This comprehensive investigation was performed to evaluate the expression level and potential clinical value of NEAT1 in digestive system malignancies. A total of 57 lncRNA datasets of microarray or RNA-seq and 5 publications were included. The pooled standard mean deviation (SMD) indicated that NEAT1 was down-regulated in esophageal carcinoma (ESCA, SMD = −0.35, 95% CI: −0.5~-0.20, P < 0.0001) and hepatocellular carcinoma (HCC, SMD = −0.47, 95% CI: −0.60~-0.34, P < 0.0001), while in pancreatic cancer (PC), NEAT1 was up-regulated (SMD = 0.45, 95% CI: 0.2~0.71, P = 0.001). However, NEAT1 expression in gastric cancer (GC), colorectal cancer (CRC), biliary tract cancer (BTC) and gallbladder carcinoma (GBC) showed no significant difference between cancer and control groups. The pooled area under the curve values for ESCA, GC, CRC, PC and HCC were 0.60, 0.89, 0.81, 0.77 and 0.69, respectively. Furthermore, our result demonstrated that a high expression of NEAT1 predicted an unfavorable prognosis in patients with digestive system malignancies (HR: 1.50, 95% CI: 1.28-1.76, P < 0.0001). Our study suggests that NEAT1 may play different roles in the initiation and progression of digestive system cancers and could be a potential diagnostic and prognostic biomarker in patients with digestive system carcinomas. Further and stricter studies with a larger number of cases are necessary to strengthen our conclusions. Impact Journals LLC 2017-01-19 /pmc/articles/PMC5392277/ /pubmed/28118609 http://dx.doi.org/10.18632/oncotarget.14756 Text en Copyright: © 2017 Xiong et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Xiong, Dan-Dan Feng, Zhen-Bo Cen, Wei-Luan Zeng, Jing-Jing Liang, Lu Tang, Rui-Xue Gan, Xiao-Ning Liang, Hai-Wei Li, Zu-Yun Chen, Gang Luo, Dian-Zhong The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets |
title | The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets |
title_full | The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets |
title_fullStr | The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets |
title_full_unstemmed | The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets |
title_short | The clinical value of lncRNA NEAT1 in digestive system malignancies: A comprehensive investigation based on 57 microarray and RNA-seq datasets |
title_sort | clinical value of lncrna neat1 in digestive system malignancies: a comprehensive investigation based on 57 microarray and rna-seq datasets |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5392277/ https://www.ncbi.nlm.nih.gov/pubmed/28118609 http://dx.doi.org/10.18632/oncotarget.14756 |
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