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Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer

Radiomics characterizes tumor phenotypes by extracting large numbers of quantitative features from radiological images. Radiomic features have been shown to provide prognostic value in predicting clinical outcomes in several studies. However, several challenges including feature redundancy, unbalanc...

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Detalles Bibliográficos
Autores principales: Zhang, Yucheng, Oikonomou, Anastasia, Wong, Alexander, Haider, Masoom A., Khalvati, Farzad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5394465/
https://www.ncbi.nlm.nih.gov/pubmed/28418006
http://dx.doi.org/10.1038/srep46349
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author Zhang, Yucheng
Oikonomou, Anastasia
Wong, Alexander
Haider, Masoom A.
Khalvati, Farzad
author_facet Zhang, Yucheng
Oikonomou, Anastasia
Wong, Alexander
Haider, Masoom A.
Khalvati, Farzad
author_sort Zhang, Yucheng
collection PubMed
description Radiomics characterizes tumor phenotypes by extracting large numbers of quantitative features from radiological images. Radiomic features have been shown to provide prognostic value in predicting clinical outcomes in several studies. However, several challenges including feature redundancy, unbalanced data, and small sample sizes have led to relatively low predictive accuracy. In this study, we explore different strategies for overcoming these challenges and improving predictive performance of radiomics-based prognosis for non-small cell lung cancer (NSCLC). CT images of 112 patients (mean age 75 years) with NSCLC who underwent stereotactic body radiotherapy were used to predict recurrence, death, and recurrence-free survival using a comprehensive radiomics analysis. Different feature selection and predictive modeling techniques were used to determine the optimal configuration of prognosis analysis. To address feature redundancy, comprehensive analysis indicated that Random Forest models and Principal Component Analysis were optimum predictive modeling and feature selection methods, respectively, for achieving high prognosis performance. To address unbalanced data, Synthetic Minority Over-sampling technique was found to significantly increase predictive accuracy. A full analysis of variance showed that data endpoints, feature selection techniques, and classifiers were significant factors in affecting predictive accuracy, suggesting that these factors must be investigated when building radiomics-based predictive models for cancer prognosis.
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spelling pubmed-53944652017-04-20 Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer Zhang, Yucheng Oikonomou, Anastasia Wong, Alexander Haider, Masoom A. Khalvati, Farzad Sci Rep Article Radiomics characterizes tumor phenotypes by extracting large numbers of quantitative features from radiological images. Radiomic features have been shown to provide prognostic value in predicting clinical outcomes in several studies. However, several challenges including feature redundancy, unbalanced data, and small sample sizes have led to relatively low predictive accuracy. In this study, we explore different strategies for overcoming these challenges and improving predictive performance of radiomics-based prognosis for non-small cell lung cancer (NSCLC). CT images of 112 patients (mean age 75 years) with NSCLC who underwent stereotactic body radiotherapy were used to predict recurrence, death, and recurrence-free survival using a comprehensive radiomics analysis. Different feature selection and predictive modeling techniques were used to determine the optimal configuration of prognosis analysis. To address feature redundancy, comprehensive analysis indicated that Random Forest models and Principal Component Analysis were optimum predictive modeling and feature selection methods, respectively, for achieving high prognosis performance. To address unbalanced data, Synthetic Minority Over-sampling technique was found to significantly increase predictive accuracy. A full analysis of variance showed that data endpoints, feature selection techniques, and classifiers were significant factors in affecting predictive accuracy, suggesting that these factors must be investigated when building radiomics-based predictive models for cancer prognosis. Nature Publishing Group 2017-04-18 /pmc/articles/PMC5394465/ /pubmed/28418006 http://dx.doi.org/10.1038/srep46349 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Zhang, Yucheng
Oikonomou, Anastasia
Wong, Alexander
Haider, Masoom A.
Khalvati, Farzad
Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
title Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
title_full Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
title_fullStr Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
title_full_unstemmed Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
title_short Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
title_sort radiomics-based prognosis analysis for non-small cell lung cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5394465/
https://www.ncbi.nlm.nih.gov/pubmed/28418006
http://dx.doi.org/10.1038/srep46349
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