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Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer
Radiomics characterizes tumor phenotypes by extracting large numbers of quantitative features from radiological images. Radiomic features have been shown to provide prognostic value in predicting clinical outcomes in several studies. However, several challenges including feature redundancy, unbalanc...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5394465/ https://www.ncbi.nlm.nih.gov/pubmed/28418006 http://dx.doi.org/10.1038/srep46349 |
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author | Zhang, Yucheng Oikonomou, Anastasia Wong, Alexander Haider, Masoom A. Khalvati, Farzad |
author_facet | Zhang, Yucheng Oikonomou, Anastasia Wong, Alexander Haider, Masoom A. Khalvati, Farzad |
author_sort | Zhang, Yucheng |
collection | PubMed |
description | Radiomics characterizes tumor phenotypes by extracting large numbers of quantitative features from radiological images. Radiomic features have been shown to provide prognostic value in predicting clinical outcomes in several studies. However, several challenges including feature redundancy, unbalanced data, and small sample sizes have led to relatively low predictive accuracy. In this study, we explore different strategies for overcoming these challenges and improving predictive performance of radiomics-based prognosis for non-small cell lung cancer (NSCLC). CT images of 112 patients (mean age 75 years) with NSCLC who underwent stereotactic body radiotherapy were used to predict recurrence, death, and recurrence-free survival using a comprehensive radiomics analysis. Different feature selection and predictive modeling techniques were used to determine the optimal configuration of prognosis analysis. To address feature redundancy, comprehensive analysis indicated that Random Forest models and Principal Component Analysis were optimum predictive modeling and feature selection methods, respectively, for achieving high prognosis performance. To address unbalanced data, Synthetic Minority Over-sampling technique was found to significantly increase predictive accuracy. A full analysis of variance showed that data endpoints, feature selection techniques, and classifiers were significant factors in affecting predictive accuracy, suggesting that these factors must be investigated when building radiomics-based predictive models for cancer prognosis. |
format | Online Article Text |
id | pubmed-5394465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53944652017-04-20 Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer Zhang, Yucheng Oikonomou, Anastasia Wong, Alexander Haider, Masoom A. Khalvati, Farzad Sci Rep Article Radiomics characterizes tumor phenotypes by extracting large numbers of quantitative features from radiological images. Radiomic features have been shown to provide prognostic value in predicting clinical outcomes in several studies. However, several challenges including feature redundancy, unbalanced data, and small sample sizes have led to relatively low predictive accuracy. In this study, we explore different strategies for overcoming these challenges and improving predictive performance of radiomics-based prognosis for non-small cell lung cancer (NSCLC). CT images of 112 patients (mean age 75 years) with NSCLC who underwent stereotactic body radiotherapy were used to predict recurrence, death, and recurrence-free survival using a comprehensive radiomics analysis. Different feature selection and predictive modeling techniques were used to determine the optimal configuration of prognosis analysis. To address feature redundancy, comprehensive analysis indicated that Random Forest models and Principal Component Analysis were optimum predictive modeling and feature selection methods, respectively, for achieving high prognosis performance. To address unbalanced data, Synthetic Minority Over-sampling technique was found to significantly increase predictive accuracy. A full analysis of variance showed that data endpoints, feature selection techniques, and classifiers were significant factors in affecting predictive accuracy, suggesting that these factors must be investigated when building radiomics-based predictive models for cancer prognosis. Nature Publishing Group 2017-04-18 /pmc/articles/PMC5394465/ /pubmed/28418006 http://dx.doi.org/10.1038/srep46349 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Zhang, Yucheng Oikonomou, Anastasia Wong, Alexander Haider, Masoom A. Khalvati, Farzad Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer |
title | Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer |
title_full | Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer |
title_fullStr | Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer |
title_full_unstemmed | Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer |
title_short | Radiomics-based Prognosis Analysis for Non-Small Cell Lung Cancer |
title_sort | radiomics-based prognosis analysis for non-small cell lung cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5394465/ https://www.ncbi.nlm.nih.gov/pubmed/28418006 http://dx.doi.org/10.1038/srep46349 |
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