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Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling

Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and...

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Autores principales: Snopková, Kateřina, Sedlář, Karel, Bosák, Juraj, Chaloupková, Eva, Sedláček, Ivo, Provazník, Ivo, Šmajs, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395255/
https://www.ncbi.nlm.nih.gov/pubmed/28469381
http://dx.doi.org/10.1177/1176934317700863
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author Snopková, Kateřina
Sedlář, Karel
Bosák, Juraj
Chaloupková, Eva
Sedláček, Ivo
Provazník, Ivo
Šmajs, David
author_facet Snopková, Kateřina
Sedlář, Karel
Bosák, Juraj
Chaloupková, Eva
Sedláček, Ivo
Provazník, Ivo
Šmajs, David
author_sort Snopková, Kateřina
collection PubMed
description Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and metabolic fingerprinting confirmed the phylogenetic position of P. fontium inside the group of atypical H(2)S producers. Genomic data have revealed that P. fontium 24613 has limited pathogenic potential, although there are signs of genome decay. Although the lack of specific virulence factors and no association with a host species suggest a free-living style, the signs of genome decay suggest a process of adaptation to an as-yet-unknown host.
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spelling pubmed-53952552017-05-03 Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling Snopková, Kateřina Sedlář, Karel Bosák, Juraj Chaloupková, Eva Sedláček, Ivo Provazník, Ivo Šmajs, David Evol Bioinform Online Original Research Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and metabolic fingerprinting confirmed the phylogenetic position of P. fontium inside the group of atypical H(2)S producers. Genomic data have revealed that P. fontium 24613 has limited pathogenic potential, although there are signs of genome decay. Although the lack of specific virulence factors and no association with a host species suggest a free-living style, the signs of genome decay suggest a process of adaptation to an as-yet-unknown host. SAGE Publications 2017-03-30 /pmc/articles/PMC5395255/ /pubmed/28469381 http://dx.doi.org/10.1177/1176934317700863 Text en © The Author(s) 2017 http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page(https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research
Snopková, Kateřina
Sedlář, Karel
Bosák, Juraj
Chaloupková, Eva
Sedláček, Ivo
Provazník, Ivo
Šmajs, David
Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
title Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
title_full Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
title_fullStr Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
title_full_unstemmed Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
title_short Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
title_sort free-living enterobacterium pragia fontium 24613: complete genome sequence and metabolic profiling
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395255/
https://www.ncbi.nlm.nih.gov/pubmed/28469381
http://dx.doi.org/10.1177/1176934317700863
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