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Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling
Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
SAGE Publications
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395255/ https://www.ncbi.nlm.nih.gov/pubmed/28469381 http://dx.doi.org/10.1177/1176934317700863 |
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author | Snopková, Kateřina Sedlář, Karel Bosák, Juraj Chaloupková, Eva Sedláček, Ivo Provazník, Ivo Šmajs, David |
author_facet | Snopková, Kateřina Sedlář, Karel Bosák, Juraj Chaloupková, Eva Sedláček, Ivo Provazník, Ivo Šmajs, David |
author_sort | Snopková, Kateřina |
collection | PubMed |
description | Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and metabolic fingerprinting confirmed the phylogenetic position of P. fontium inside the group of atypical H(2)S producers. Genomic data have revealed that P. fontium 24613 has limited pathogenic potential, although there are signs of genome decay. Although the lack of specific virulence factors and no association with a host species suggest a free-living style, the signs of genome decay suggest a process of adaptation to an as-yet-unknown host. |
format | Online Article Text |
id | pubmed-5395255 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | SAGE Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-53952552017-05-03 Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling Snopková, Kateřina Sedlář, Karel Bosák, Juraj Chaloupková, Eva Sedláček, Ivo Provazník, Ivo Šmajs, David Evol Bioinform Online Original Research Pragia fontium is one of the few species that belongs to the group of atypical hydrogen sulfide-producing enterobacteria. Unlike other members of this closely related group, P. fontium is not associated with any known host and has been reported as a free-living bacterium. Whole genome sequencing and metabolic fingerprinting confirmed the phylogenetic position of P. fontium inside the group of atypical H(2)S producers. Genomic data have revealed that P. fontium 24613 has limited pathogenic potential, although there are signs of genome decay. Although the lack of specific virulence factors and no association with a host species suggest a free-living style, the signs of genome decay suggest a process of adaptation to an as-yet-unknown host. SAGE Publications 2017-03-30 /pmc/articles/PMC5395255/ /pubmed/28469381 http://dx.doi.org/10.1177/1176934317700863 Text en © The Author(s) 2017 http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page(https://us.sagepub.com/en-us/nam/open-access-at-sage). |
spellingShingle | Original Research Snopková, Kateřina Sedlář, Karel Bosák, Juraj Chaloupková, Eva Sedláček, Ivo Provazník, Ivo Šmajs, David Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling |
title | Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling |
title_full | Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling |
title_fullStr | Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling |
title_full_unstemmed | Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling |
title_short | Free-Living Enterobacterium Pragia fontium 24613: Complete Genome Sequence and Metabolic Profiling |
title_sort | free-living enterobacterium pragia fontium 24613: complete genome sequence and metabolic profiling |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395255/ https://www.ncbi.nlm.nih.gov/pubmed/28469381 http://dx.doi.org/10.1177/1176934317700863 |
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