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Towards automatic pulmonary nodule management in lung cancer screening with deep learning
The introduction of lung cancer screening programs will produce an unprecedented amount of chest CT scans in the near future, which radiologists will have to read in order to decide on a patient follow-up strategy. According to the current guidelines, the workup of screen-detected nodules strongly r...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395959/ https://www.ncbi.nlm.nih.gov/pubmed/28422152 http://dx.doi.org/10.1038/srep46479 |
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author | Ciompi, Francesco Chung, Kaman van Riel, Sarah J. Setio, Arnaud Arindra Adiyoso Gerke, Paul K. Jacobs, Colin Th. Scholten, Ernst Schaefer-Prokop, Cornelia Wille, Mathilde M. W. Marchianò, Alfonso Pastorino, Ugo Prokop, Mathias van Ginneken, Bram |
author_facet | Ciompi, Francesco Chung, Kaman van Riel, Sarah J. Setio, Arnaud Arindra Adiyoso Gerke, Paul K. Jacobs, Colin Th. Scholten, Ernst Schaefer-Prokop, Cornelia Wille, Mathilde M. W. Marchianò, Alfonso Pastorino, Ugo Prokop, Mathias van Ginneken, Bram |
author_sort | Ciompi, Francesco |
collection | PubMed |
description | The introduction of lung cancer screening programs will produce an unprecedented amount of chest CT scans in the near future, which radiologists will have to read in order to decide on a patient follow-up strategy. According to the current guidelines, the workup of screen-detected nodules strongly relies on nodule size and nodule type. In this paper, we present a deep learning system based on multi-stream multi-scale convolutional networks, which automatically classifies all nodule types relevant for nodule workup. The system processes raw CT data containing a nodule without the need for any additional information such as nodule segmentation or nodule size and learns a representation of 3D data by analyzing an arbitrary number of 2D views of a given nodule. The deep learning system was trained with data from the Italian MILD screening trial and validated on an independent set of data from the Danish DLCST screening trial. We analyze the advantage of processing nodules at multiple scales with a multi-stream convolutional network architecture, and we show that the proposed deep learning system achieves performance at classifying nodule type that surpasses the one of classical machine learning approaches and is within the inter-observer variability among four experienced human observers. |
format | Online Article Text |
id | pubmed-5395959 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53959592017-04-21 Towards automatic pulmonary nodule management in lung cancer screening with deep learning Ciompi, Francesco Chung, Kaman van Riel, Sarah J. Setio, Arnaud Arindra Adiyoso Gerke, Paul K. Jacobs, Colin Th. Scholten, Ernst Schaefer-Prokop, Cornelia Wille, Mathilde M. W. Marchianò, Alfonso Pastorino, Ugo Prokop, Mathias van Ginneken, Bram Sci Rep Article The introduction of lung cancer screening programs will produce an unprecedented amount of chest CT scans in the near future, which radiologists will have to read in order to decide on a patient follow-up strategy. According to the current guidelines, the workup of screen-detected nodules strongly relies on nodule size and nodule type. In this paper, we present a deep learning system based on multi-stream multi-scale convolutional networks, which automatically classifies all nodule types relevant for nodule workup. The system processes raw CT data containing a nodule without the need for any additional information such as nodule segmentation or nodule size and learns a representation of 3D data by analyzing an arbitrary number of 2D views of a given nodule. The deep learning system was trained with data from the Italian MILD screening trial and validated on an independent set of data from the Danish DLCST screening trial. We analyze the advantage of processing nodules at multiple scales with a multi-stream convolutional network architecture, and we show that the proposed deep learning system achieves performance at classifying nodule type that surpasses the one of classical machine learning approaches and is within the inter-observer variability among four experienced human observers. Nature Publishing Group 2017-04-19 /pmc/articles/PMC5395959/ /pubmed/28422152 http://dx.doi.org/10.1038/srep46479 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Ciompi, Francesco Chung, Kaman van Riel, Sarah J. Setio, Arnaud Arindra Adiyoso Gerke, Paul K. Jacobs, Colin Th. Scholten, Ernst Schaefer-Prokop, Cornelia Wille, Mathilde M. W. Marchianò, Alfonso Pastorino, Ugo Prokop, Mathias van Ginneken, Bram Towards automatic pulmonary nodule management in lung cancer screening with deep learning |
title | Towards automatic pulmonary nodule management in lung cancer screening with deep learning |
title_full | Towards automatic pulmonary nodule management in lung cancer screening with deep learning |
title_fullStr | Towards automatic pulmonary nodule management in lung cancer screening with deep learning |
title_full_unstemmed | Towards automatic pulmonary nodule management in lung cancer screening with deep learning |
title_short | Towards automatic pulmonary nodule management in lung cancer screening with deep learning |
title_sort | towards automatic pulmonary nodule management in lung cancer screening with deep learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5395959/ https://www.ncbi.nlm.nih.gov/pubmed/28422152 http://dx.doi.org/10.1038/srep46479 |
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