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Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
Carboxylic acid reductase enzymes (CARs) meet the demand in synthetic chemistry for a green and regiospecific route to aldehydes from their respective carboxylic acids. However, relatively few of these enzymes have been characterized. A sequence alignment with members of the ANL (Acyl‐CoA synthetase...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5396282/ https://www.ncbi.nlm.nih.gov/pubmed/28450969 http://dx.doi.org/10.1002/cctc.201601249 |
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author | Finnigan, William Thomas, Adam Cromar, Holly Gough, Ben Snajdrova, Radka Adams, Joseph P. Littlechild, Jennifer A. Harmer, Nicholas J. |
author_facet | Finnigan, William Thomas, Adam Cromar, Holly Gough, Ben Snajdrova, Radka Adams, Joseph P. Littlechild, Jennifer A. Harmer, Nicholas J. |
author_sort | Finnigan, William |
collection | PubMed |
description | Carboxylic acid reductase enzymes (CARs) meet the demand in synthetic chemistry for a green and regiospecific route to aldehydes from their respective carboxylic acids. However, relatively few of these enzymes have been characterized. A sequence alignment with members of the ANL (Acyl‐CoA synthetase/ NRPS adenylation domain/Luciferase) superfamily of enzymes shed light on CAR functional dynamics. Four unstudied enzymes were selected by using a phylogenetic analysis of known and hypothetical CARs, and for the first time, a thorough biochemical characterization was performed. Kinetic analysis of these enzymes with various substrates shows that they have a broad but similar substrate specificity. Electron‐rich acids are favored, which suggests that the first step in the proposed reaction mechanism, attack by the carboxylate on the α‐phosphate of adenosine triphosphate (ATP), is the step that determines the substrate specificity and reaction kinetics. The effects of pH and temperature provide a clear operational window for the use of these CARs, whereas an investigation of product inhibition by NADP(+), adenosine monophosphate, and pyrophosphate indicates that the binding of substrates at the adenylation domain is ordered with ATP binding first. This study consolidates CARs as important and exciting enzymes in the toolbox for sustainable chemistry and provides specifications for their use as a biocatalyst. |
format | Online Article Text |
id | pubmed-5396282 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-53962822017-04-25 Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry Finnigan, William Thomas, Adam Cromar, Holly Gough, Ben Snajdrova, Radka Adams, Joseph P. Littlechild, Jennifer A. Harmer, Nicholas J. ChemCatChem Full Papers Carboxylic acid reductase enzymes (CARs) meet the demand in synthetic chemistry for a green and regiospecific route to aldehydes from their respective carboxylic acids. However, relatively few of these enzymes have been characterized. A sequence alignment with members of the ANL (Acyl‐CoA synthetase/ NRPS adenylation domain/Luciferase) superfamily of enzymes shed light on CAR functional dynamics. Four unstudied enzymes were selected by using a phylogenetic analysis of known and hypothetical CARs, and for the first time, a thorough biochemical characterization was performed. Kinetic analysis of these enzymes with various substrates shows that they have a broad but similar substrate specificity. Electron‐rich acids are favored, which suggests that the first step in the proposed reaction mechanism, attack by the carboxylate on the α‐phosphate of adenosine triphosphate (ATP), is the step that determines the substrate specificity and reaction kinetics. The effects of pH and temperature provide a clear operational window for the use of these CARs, whereas an investigation of product inhibition by NADP(+), adenosine monophosphate, and pyrophosphate indicates that the binding of substrates at the adenylation domain is ordered with ATP binding first. This study consolidates CARs as important and exciting enzymes in the toolbox for sustainable chemistry and provides specifications for their use as a biocatalyst. John Wiley and Sons Inc. 2017-02-14 2017-03-20 /pmc/articles/PMC5396282/ /pubmed/28450969 http://dx.doi.org/10.1002/cctc.201601249 Text en © 2017 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Full Papers Finnigan, William Thomas, Adam Cromar, Holly Gough, Ben Snajdrova, Radka Adams, Joseph P. Littlechild, Jennifer A. Harmer, Nicholas J. Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry |
title | Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry |
title_full | Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry |
title_fullStr | Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry |
title_full_unstemmed | Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry |
title_short | Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry |
title_sort | characterization of carboxylic acid reductases as enzymes in the toolbox for synthetic chemistry |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5396282/ https://www.ncbi.nlm.nih.gov/pubmed/28450969 http://dx.doi.org/10.1002/cctc.201601249 |
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