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Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry

Carboxylic acid reductase enzymes (CARs) meet the demand in synthetic chemistry for a green and regiospecific route to aldehydes from their respective carboxylic acids. However, relatively few of these enzymes have been characterized. A sequence alignment with members of the ANL (Acyl‐CoA synthetase...

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Autores principales: Finnigan, William, Thomas, Adam, Cromar, Holly, Gough, Ben, Snajdrova, Radka, Adams, Joseph P., Littlechild, Jennifer A., Harmer, Nicholas J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5396282/
https://www.ncbi.nlm.nih.gov/pubmed/28450969
http://dx.doi.org/10.1002/cctc.201601249
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author Finnigan, William
Thomas, Adam
Cromar, Holly
Gough, Ben
Snajdrova, Radka
Adams, Joseph P.
Littlechild, Jennifer A.
Harmer, Nicholas J.
author_facet Finnigan, William
Thomas, Adam
Cromar, Holly
Gough, Ben
Snajdrova, Radka
Adams, Joseph P.
Littlechild, Jennifer A.
Harmer, Nicholas J.
author_sort Finnigan, William
collection PubMed
description Carboxylic acid reductase enzymes (CARs) meet the demand in synthetic chemistry for a green and regiospecific route to aldehydes from their respective carboxylic acids. However, relatively few of these enzymes have been characterized. A sequence alignment with members of the ANL (Acyl‐CoA synthetase/ NRPS adenylation domain/Luciferase) superfamily of enzymes shed light on CAR functional dynamics. Four unstudied enzymes were selected by using a phylogenetic analysis of known and hypothetical CARs, and for the first time, a thorough biochemical characterization was performed. Kinetic analysis of these enzymes with various substrates shows that they have a broad but similar substrate specificity. Electron‐rich acids are favored, which suggests that the first step in the proposed reaction mechanism, attack by the carboxylate on the α‐phosphate of adenosine triphosphate (ATP), is the step that determines the substrate specificity and reaction kinetics. The effects of pH and temperature provide a clear operational window for the use of these CARs, whereas an investigation of product inhibition by NADP(+), adenosine monophosphate, and pyrophosphate indicates that the binding of substrates at the adenylation domain is ordered with ATP binding first. This study consolidates CARs as important and exciting enzymes in the toolbox for sustainable chemistry and provides specifications for their use as a biocatalyst.
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spelling pubmed-53962822017-04-25 Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry Finnigan, William Thomas, Adam Cromar, Holly Gough, Ben Snajdrova, Radka Adams, Joseph P. Littlechild, Jennifer A. Harmer, Nicholas J. ChemCatChem Full Papers Carboxylic acid reductase enzymes (CARs) meet the demand in synthetic chemistry for a green and regiospecific route to aldehydes from their respective carboxylic acids. However, relatively few of these enzymes have been characterized. A sequence alignment with members of the ANL (Acyl‐CoA synthetase/ NRPS adenylation domain/Luciferase) superfamily of enzymes shed light on CAR functional dynamics. Four unstudied enzymes were selected by using a phylogenetic analysis of known and hypothetical CARs, and for the first time, a thorough biochemical characterization was performed. Kinetic analysis of these enzymes with various substrates shows that they have a broad but similar substrate specificity. Electron‐rich acids are favored, which suggests that the first step in the proposed reaction mechanism, attack by the carboxylate on the α‐phosphate of adenosine triphosphate (ATP), is the step that determines the substrate specificity and reaction kinetics. The effects of pH and temperature provide a clear operational window for the use of these CARs, whereas an investigation of product inhibition by NADP(+), adenosine monophosphate, and pyrophosphate indicates that the binding of substrates at the adenylation domain is ordered with ATP binding first. This study consolidates CARs as important and exciting enzymes in the toolbox for sustainable chemistry and provides specifications for their use as a biocatalyst. John Wiley and Sons Inc. 2017-02-14 2017-03-20 /pmc/articles/PMC5396282/ /pubmed/28450969 http://dx.doi.org/10.1002/cctc.201601249 Text en © 2017 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Finnigan, William
Thomas, Adam
Cromar, Holly
Gough, Ben
Snajdrova, Radka
Adams, Joseph P.
Littlechild, Jennifer A.
Harmer, Nicholas J.
Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
title Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
title_full Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
title_fullStr Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
title_full_unstemmed Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
title_short Characterization of Carboxylic Acid Reductases as Enzymes in the Toolbox for Synthetic Chemistry
title_sort characterization of carboxylic acid reductases as enzymes in the toolbox for synthetic chemistry
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5396282/
https://www.ncbi.nlm.nih.gov/pubmed/28450969
http://dx.doi.org/10.1002/cctc.201601249
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