Cargando…
Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience
Biobanking at Duke University has existed for decades and has grown over time in silos and based on specialized needs, as is true with most biomedical research centers. These silos developed informatics systems to support their own individual requirements, with no regard for semantic or syntactic in...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mary Ann Liebert, Inc.
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397220/ https://www.ncbi.nlm.nih.gov/pubmed/28338350 http://dx.doi.org/10.1089/bio.2016.0092 |
_version_ | 1783230226868731904 |
---|---|
author | Ellis, Helena Joshi, Mary-Beth Lynn, Aenoch J. Walden, Anita |
author_facet | Ellis, Helena Joshi, Mary-Beth Lynn, Aenoch J. Walden, Anita |
author_sort | Ellis, Helena |
collection | PubMed |
description | Biobanking at Duke University has existed for decades and has grown over time in silos and based on specialized needs, as is true with most biomedical research centers. These silos developed informatics systems to support their own individual requirements, with no regard for semantic or syntactic interoperability. Duke undertook an initiative to implement an enterprise-wide biobanking information system to serve its many diverse biobanking entities. A significant part of this initiative was the development of a common terminology for use in the commercial software platform. Common terminology provides the foundation for interoperability across biobanks for data and information sharing. We engaged experts in research, informatics, and biobanking through a consensus-driven process to agree on 361 terms and their definitions that encompass the lifecycle of a biospecimen. Existing standards, common terms, and data elements from published articles provided a foundation on which to build the biobanking terminology; a broader set of stakeholders then provided additional input and feedback in a secondary vetting process. The resulting standardized biobanking terminology is now available for sharing with the biobanking community to serve as a foundation for other institutions who are considering a similar initiative. |
format | Online Article Text |
id | pubmed-5397220 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Mary Ann Liebert, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-53972202017-04-27 Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience Ellis, Helena Joshi, Mary-Beth Lynn, Aenoch J. Walden, Anita Biopreserv Biobank Original Articles Biobanking at Duke University has existed for decades and has grown over time in silos and based on specialized needs, as is true with most biomedical research centers. These silos developed informatics systems to support their own individual requirements, with no regard for semantic or syntactic interoperability. Duke undertook an initiative to implement an enterprise-wide biobanking information system to serve its many diverse biobanking entities. A significant part of this initiative was the development of a common terminology for use in the commercial software platform. Common terminology provides the foundation for interoperability across biobanks for data and information sharing. We engaged experts in research, informatics, and biobanking through a consensus-driven process to agree on 361 terms and their definitions that encompass the lifecycle of a biospecimen. Existing standards, common terms, and data elements from published articles provided a foundation on which to build the biobanking terminology; a broader set of stakeholders then provided additional input and feedback in a secondary vetting process. The resulting standardized biobanking terminology is now available for sharing with the biobanking community to serve as a foundation for other institutions who are considering a similar initiative. Mary Ann Liebert, Inc. 2017-04-01 2017-04-01 /pmc/articles/PMC5397220/ /pubmed/28338350 http://dx.doi.org/10.1089/bio.2016.0092 Text en © Helena Ellis et al., 2017; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons Attribution Noncommercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Original Articles Ellis, Helena Joshi, Mary-Beth Lynn, Aenoch J. Walden, Anita Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience |
title | Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience |
title_full | Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience |
title_fullStr | Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience |
title_full_unstemmed | Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience |
title_short | Consensus-Driven Development of a Terminology for Biobanking, the Duke Experience |
title_sort | consensus-driven development of a terminology for biobanking, the duke experience |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397220/ https://www.ncbi.nlm.nih.gov/pubmed/28338350 http://dx.doi.org/10.1089/bio.2016.0092 |
work_keys_str_mv | AT ellishelena consensusdrivendevelopmentofaterminologyforbiobankingthedukeexperience AT joshimarybeth consensusdrivendevelopmentofaterminologyforbiobankingthedukeexperience AT lynnaenochj consensusdrivendevelopmentofaterminologyforbiobankingthedukeexperience AT waldenanita consensusdrivendevelopmentofaterminologyforbiobankingthedukeexperience |