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Imaging genetics approach to Parkinson’s disease and its correlation with clinical score
Parkinson’s disease (PD) is a progressive neurodegenerative disorder associated with both underlying genetic factors and neuroimaging findings. Existing neuroimaging studies related to the genome in PD have mostly focused on certain candidate genes. The aim of our study was to construct a linear reg...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5399369/ https://www.ncbi.nlm.nih.gov/pubmed/28429747 http://dx.doi.org/10.1038/srep46700 |
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author | Kim, Mansu Kim, Jonghoon Lee, Seung-Hak Park, Hyunjin |
author_facet | Kim, Mansu Kim, Jonghoon Lee, Seung-Hak Park, Hyunjin |
author_sort | Kim, Mansu |
collection | PubMed |
description | Parkinson’s disease (PD) is a progressive neurodegenerative disorder associated with both underlying genetic factors and neuroimaging findings. Existing neuroimaging studies related to the genome in PD have mostly focused on certain candidate genes. The aim of our study was to construct a linear regression model using both genetic and neuroimaging features to better predict clinical scores compared to conventional approaches. We obtained neuroimaging and DNA genotyping data from a research database. Connectivity analysis was applied to identify neuroimaging features that could differentiate between healthy control (HC) and PD groups. A joint analysis of genetic and imaging information known as imaging genetics was applied to investigate genetic variants. We then compared the utility of combining different genetic variants and neuroimaging features for predicting the Movement Disorder Society-sponsored unified Parkinson’s disease rating scale (MDS-UPDRS) in a regression framework. The associative cortex, motor cortex, thalamus, and pallidum showed significantly different connectivity between the HC and PD groups. Imaging genetics analysis identified PARK2, PARK7, HtrA2, GIGYRF2, and SNCA as genetic variants that are significantly associated with imaging phenotypes. A linear regression model combining genetic and neuroimaging features predicted the MDS-UPDRS with lower error and higher correlation with the actual MDS-UPDRS compared to other models using only genetic or neuroimaging information alone. |
format | Online Article Text |
id | pubmed-5399369 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53993692017-04-21 Imaging genetics approach to Parkinson’s disease and its correlation with clinical score Kim, Mansu Kim, Jonghoon Lee, Seung-Hak Park, Hyunjin Sci Rep Article Parkinson’s disease (PD) is a progressive neurodegenerative disorder associated with both underlying genetic factors and neuroimaging findings. Existing neuroimaging studies related to the genome in PD have mostly focused on certain candidate genes. The aim of our study was to construct a linear regression model using both genetic and neuroimaging features to better predict clinical scores compared to conventional approaches. We obtained neuroimaging and DNA genotyping data from a research database. Connectivity analysis was applied to identify neuroimaging features that could differentiate between healthy control (HC) and PD groups. A joint analysis of genetic and imaging information known as imaging genetics was applied to investigate genetic variants. We then compared the utility of combining different genetic variants and neuroimaging features for predicting the Movement Disorder Society-sponsored unified Parkinson’s disease rating scale (MDS-UPDRS) in a regression framework. The associative cortex, motor cortex, thalamus, and pallidum showed significantly different connectivity between the HC and PD groups. Imaging genetics analysis identified PARK2, PARK7, HtrA2, GIGYRF2, and SNCA as genetic variants that are significantly associated with imaging phenotypes. A linear regression model combining genetic and neuroimaging features predicted the MDS-UPDRS with lower error and higher correlation with the actual MDS-UPDRS compared to other models using only genetic or neuroimaging information alone. Nature Publishing Group 2017-04-21 /pmc/articles/PMC5399369/ /pubmed/28429747 http://dx.doi.org/10.1038/srep46700 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Kim, Mansu Kim, Jonghoon Lee, Seung-Hak Park, Hyunjin Imaging genetics approach to Parkinson’s disease and its correlation with clinical score |
title | Imaging genetics approach to Parkinson’s disease and its correlation with clinical score |
title_full | Imaging genetics approach to Parkinson’s disease and its correlation with clinical score |
title_fullStr | Imaging genetics approach to Parkinson’s disease and its correlation with clinical score |
title_full_unstemmed | Imaging genetics approach to Parkinson’s disease and its correlation with clinical score |
title_short | Imaging genetics approach to Parkinson’s disease and its correlation with clinical score |
title_sort | imaging genetics approach to parkinson’s disease and its correlation with clinical score |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5399369/ https://www.ncbi.nlm.nih.gov/pubmed/28429747 http://dx.doi.org/10.1038/srep46700 |
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