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Compilation of tRNA sequences and sequences of tRNA genes

Maintained at the Universität Bayreuth, Bayreuth, Germany, the Compilation of tRNA Sequences and Sequences of tRNA Genes is accessible at the URL http://www.tRNA.uni-bayreuth.de with mirror site located at the Institute of Protein Research, Pushchino, Russia (http://alpha.protres.ru/trnadbase). The...

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Detalles Bibliográficos
Autores principales: Sprinzl, Mathias, Vassilenko, Konstantin S.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC539966/
https://www.ncbi.nlm.nih.gov/pubmed/15608164
http://dx.doi.org/10.1093/nar/gki012
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author Sprinzl, Mathias
Vassilenko, Konstantin S.
author_facet Sprinzl, Mathias
Vassilenko, Konstantin S.
author_sort Sprinzl, Mathias
collection PubMed
description Maintained at the Universität Bayreuth, Bayreuth, Germany, the Compilation of tRNA Sequences and Sequences of tRNA Genes is accessible at the URL http://www.tRNA.uni-bayreuth.de with mirror site located at the Institute of Protein Research, Pushchino, Russia (http://alpha.protres.ru/trnadbase). The compilation is a searchable, periodically updated database of currently available tRNA sequences. The present version of the database contains a new Genomic tRNA Compilation including the sequences of tRNA genes from genomic sequences published up to July 2003. It consists of about 5800 tRNA gene sequences from 111 organisms covering archaea, bacteria, higher and lower eukarya. The former Compilation of tRNA Genes (up to the end of 1998) and the updated Compilation tRNA Sequences (561 entries) are also supported by the new software. The database can be explored by using multiple search criteria and sequence templates. The database provides a service that allows to obtain statistical information on the occurrences of certain bases at given positions of the tRNA sequences. This allows phylogenic studies and search for identity elements in respect to interactions of tRNAs with various enzymes.
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spelling pubmed-5399662005-01-04 Compilation of tRNA sequences and sequences of tRNA genes Sprinzl, Mathias Vassilenko, Konstantin S. Nucleic Acids Res Articles Maintained at the Universität Bayreuth, Bayreuth, Germany, the Compilation of tRNA Sequences and Sequences of tRNA Genes is accessible at the URL http://www.tRNA.uni-bayreuth.de with mirror site located at the Institute of Protein Research, Pushchino, Russia (http://alpha.protres.ru/trnadbase). The compilation is a searchable, periodically updated database of currently available tRNA sequences. The present version of the database contains a new Genomic tRNA Compilation including the sequences of tRNA genes from genomic sequences published up to July 2003. It consists of about 5800 tRNA gene sequences from 111 organisms covering archaea, bacteria, higher and lower eukarya. The former Compilation of tRNA Genes (up to the end of 1998) and the updated Compilation tRNA Sequences (561 entries) are also supported by the new software. The database can be explored by using multiple search criteria and sequence templates. The database provides a service that allows to obtain statistical information on the occurrences of certain bases at given positions of the tRNA sequences. This allows phylogenic studies and search for identity elements in respect to interactions of tRNAs with various enzymes. Oxford University Press 2005-01-01 2004-12-17 /pmc/articles/PMC539966/ /pubmed/15608164 http://dx.doi.org/10.1093/nar/gki012 Text en Copyright © 2005 Oxford University Press
spellingShingle Articles
Sprinzl, Mathias
Vassilenko, Konstantin S.
Compilation of tRNA sequences and sequences of tRNA genes
title Compilation of tRNA sequences and sequences of tRNA genes
title_full Compilation of tRNA sequences and sequences of tRNA genes
title_fullStr Compilation of tRNA sequences and sequences of tRNA genes
title_full_unstemmed Compilation of tRNA sequences and sequences of tRNA genes
title_short Compilation of tRNA sequences and sequences of tRNA genes
title_sort compilation of trna sequences and sequences of trna genes
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC539966/
https://www.ncbi.nlm.nih.gov/pubmed/15608164
http://dx.doi.org/10.1093/nar/gki012
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