RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome

The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL) complementary DNAs (cDNAs), their promoter regions, Dissociation (Ds) transposon-tagged lines and expression dat...

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Autores principales: Sakurai, Tetsuya, Satou, Masakazu, Akiyama, Kenji, Iida, Kei, Seki, Motoaki, Kuromori, Takashi, Ito, Takuya, Konagaya, Akihiko, Toyoda, Tetsuro, Shinozaki, Kazuo
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2005
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC539968/
https://www.ncbi.nlm.nih.gov/pubmed/15608280
http://dx.doi.org/10.1093/nar/gki014
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author Sakurai, Tetsuya
Satou, Masakazu
Akiyama, Kenji
Iida, Kei
Seki, Motoaki
Kuromori, Takashi
Ito, Takuya
Konagaya, Akihiko
Toyoda, Tetsuro
Shinozaki, Kazuo
author_facet Sakurai, Tetsuya
Satou, Masakazu
Akiyama, Kenji
Iida, Kei
Seki, Motoaki
Kuromori, Takashi
Ito, Takuya
Konagaya, Akihiko
Toyoda, Tetsuro
Shinozaki, Kazuo
author_sort Sakurai, Tetsuya
collection PubMed
description The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL) complementary DNAs (cDNAs), their promoter regions, Dissociation (Ds) transposon-tagged lines and expression data from microarray experiments. RARGE provides tools for searching by resource code, sequence homology or keyword, and rapid access to detailed information on the resources. We have isolated 245 946 RAFL cDNA clones and collected 11 933 transposon-tagged lines, which are available from the RIKEN Bioresource Center and are stored in RARGE. The RARGE web interface can be accessed at http://rarge.gsc.riken.jp/. Additionally, we report 90 000 new RAFL cDNA clones here.
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spelling pubmed-5399682005-01-04 RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome Sakurai, Tetsuya Satou, Masakazu Akiyama, Kenji Iida, Kei Seki, Motoaki Kuromori, Takashi Ito, Takuya Konagaya, Akihiko Toyoda, Tetsuro Shinozaki, Kazuo Nucleic Acids Res Articles The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL) complementary DNAs (cDNAs), their promoter regions, Dissociation (Ds) transposon-tagged lines and expression data from microarray experiments. RARGE provides tools for searching by resource code, sequence homology or keyword, and rapid access to detailed information on the resources. We have isolated 245 946 RAFL cDNA clones and collected 11 933 transposon-tagged lines, which are available from the RIKEN Bioresource Center and are stored in RARGE. The RARGE web interface can be accessed at http://rarge.gsc.riken.jp/. Additionally, we report 90 000 new RAFL cDNA clones here. Oxford University Press 2005-01-01 2004-12-17 /pmc/articles/PMC539968/ /pubmed/15608280 http://dx.doi.org/10.1093/nar/gki014 Text en Copyright © 2005 Oxford University Press
spellingShingle Articles
Sakurai, Tetsuya
Satou, Masakazu
Akiyama, Kenji
Iida, Kei
Seki, Motoaki
Kuromori, Takashi
Ito, Takuya
Konagaya, Akihiko
Toyoda, Tetsuro
Shinozaki, Kazuo
RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
title RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
title_full RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
title_fullStr RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
title_full_unstemmed RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
title_short RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome
title_sort rarge: a large-scale database of riken arabidopsis resources ranging from transcriptome to phenome
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC539968/
https://www.ncbi.nlm.nih.gov/pubmed/15608280
http://dx.doi.org/10.1093/nar/gki014
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