The PEDANT genome database in 2005

The PEDANT genome database (http://pedant.gsf.de) contains pre-computed bioinformatics analyses of publicly available genomes. Its main mission is to provide robust automatic annotation of the vast majority of amino acid sequences, which have not been subjected to in-depth manual curation by human e...

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Detalles Bibliográficos
Autores principales: Riley, M. Louise, Schmidt, Thorsten, Wagner, Christian, Mewes, Hans-Werner, Frishman, Dmitrij
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2005
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC539973/
https://www.ncbi.nlm.nih.gov/pubmed/15608204
http://dx.doi.org/10.1093/nar/gki019
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author Riley, M. Louise
Schmidt, Thorsten
Wagner, Christian
Mewes, Hans-Werner
Frishman, Dmitrij
author_facet Riley, M. Louise
Schmidt, Thorsten
Wagner, Christian
Mewes, Hans-Werner
Frishman, Dmitrij
author_sort Riley, M. Louise
collection PubMed
description The PEDANT genome database (http://pedant.gsf.de) contains pre-computed bioinformatics analyses of publicly available genomes. Its main mission is to provide robust automatic annotation of the vast majority of amino acid sequences, which have not been subjected to in-depth manual curation by human experts in high-quality protein sequence databases. By design PEDANT annotation is genome-oriented, making it possible to explore genomic context of gene products, and evaluate functional and structural content of genomes using a category-based query mechanism. At present, the PEDANT database contains exhaustive annotation of over 1 240 000 proteins from 270 eubacterial, 23 archeal and 41 eukaryotic genomes.
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spelling pubmed-5399732005-01-04 The PEDANT genome database in 2005 Riley, M. Louise Schmidt, Thorsten Wagner, Christian Mewes, Hans-Werner Frishman, Dmitrij Nucleic Acids Res Articles The PEDANT genome database (http://pedant.gsf.de) contains pre-computed bioinformatics analyses of publicly available genomes. Its main mission is to provide robust automatic annotation of the vast majority of amino acid sequences, which have not been subjected to in-depth manual curation by human experts in high-quality protein sequence databases. By design PEDANT annotation is genome-oriented, making it possible to explore genomic context of gene products, and evaluate functional and structural content of genomes using a category-based query mechanism. At present, the PEDANT database contains exhaustive annotation of over 1 240 000 proteins from 270 eubacterial, 23 archeal and 41 eukaryotic genomes. Oxford University Press 2005-01-01 2004-12-17 /pmc/articles/PMC539973/ /pubmed/15608204 http://dx.doi.org/10.1093/nar/gki019 Text en Copyright © 2005 Oxford University Press
spellingShingle Articles
Riley, M. Louise
Schmidt, Thorsten
Wagner, Christian
Mewes, Hans-Werner
Frishman, Dmitrij
The PEDANT genome database in 2005
title The PEDANT genome database in 2005
title_full The PEDANT genome database in 2005
title_fullStr The PEDANT genome database in 2005
title_full_unstemmed The PEDANT genome database in 2005
title_short The PEDANT genome database in 2005
title_sort pedant genome database in 2005
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC539973/
https://www.ncbi.nlm.nih.gov/pubmed/15608204
http://dx.doi.org/10.1093/nar/gki019
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