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Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time
The appropriate timing of flowering is crucial for the reproductive success of plants. Hence, intricate genetic networks integrate various environmental and endogenous cues such as temperature or hormonal statues. These signals integrate into a network of floral pathway integrator genes. At a quanti...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5399868/ https://www.ncbi.nlm.nih.gov/pubmed/28439467 http://dx.doi.org/10.7717/peerj.3197 |
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author | van Dijk, Aalt D.J. Molenaar, Jaap |
author_facet | van Dijk, Aalt D.J. Molenaar, Jaap |
author_sort | van Dijk, Aalt D.J. |
collection | PubMed |
description | The appropriate timing of flowering is crucial for the reproductive success of plants. Hence, intricate genetic networks integrate various environmental and endogenous cues such as temperature or hormonal statues. These signals integrate into a network of floral pathway integrator genes. At a quantitative level, it is currently unclear how the impact of genetic variation in signaling pathways on flowering time is mediated by floral pathway integrator genes. Here, using datasets available from literature, we connect Arabidopsis thaliana flowering time in genetic backgrounds varying in upstream signalling components with the expression levels of floral pathway integrator genes in these genetic backgrounds. Our modelling results indicate that flowering time depends in a quite linear way on expression levels of floral pathway integrator genes. This gradual, proportional response of flowering time to upstream changes enables a gradual adaptation to changing environmental factors such as temperature and light. |
format | Online Article Text |
id | pubmed-5399868 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-53998682017-04-24 Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time van Dijk, Aalt D.J. Molenaar, Jaap PeerJ Bioinformatics The appropriate timing of flowering is crucial for the reproductive success of plants. Hence, intricate genetic networks integrate various environmental and endogenous cues such as temperature or hormonal statues. These signals integrate into a network of floral pathway integrator genes. At a quantitative level, it is currently unclear how the impact of genetic variation in signaling pathways on flowering time is mediated by floral pathway integrator genes. Here, using datasets available from literature, we connect Arabidopsis thaliana flowering time in genetic backgrounds varying in upstream signalling components with the expression levels of floral pathway integrator genes in these genetic backgrounds. Our modelling results indicate that flowering time depends in a quite linear way on expression levels of floral pathway integrator genes. This gradual, proportional response of flowering time to upstream changes enables a gradual adaptation to changing environmental factors such as temperature and light. PeerJ Inc. 2017-04-19 /pmc/articles/PMC5399868/ /pubmed/28439467 http://dx.doi.org/10.7717/peerj.3197 Text en ©2017 van Dijk and Molenaar http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics van Dijk, Aalt D.J. Molenaar, Jaap Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
title | Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
title_full | Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
title_fullStr | Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
title_full_unstemmed | Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
title_short | Floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
title_sort | floral pathway integrator gene expression mediates gradual transmission of environmental and endogenous cues to flowering time |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5399868/ https://www.ncbi.nlm.nih.gov/pubmed/28439467 http://dx.doi.org/10.7717/peerj.3197 |
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